RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CLDN23Q96B33 292 aa14.96□□□□□ -0.01
SNX6-202ENST00000396526 RNFT2Q96EX2 444 aa14.96□□□□□ -0.01
SNX6-202ENST00000396526 NDC1Q9BTX1 674 aa14.96□□□□□ -0.01
SNX6-202ENST00000396526 TAS2R16Q9NYV7 291 aa14.96□□□□□ -0.01
SNX6-202ENST00000396526 SERTAD3Q9UJW9 196 aa14.96□□□□□ -0.01
SNX6-202ENST00000396526 SIT1Q9Y3P8 196 aa14.96□□□□□ -0.01
SNX6-202ENST00000396526 ATP12AP54707 1039 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 TTLL10Q6ZVT0 673 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 UBALD2Q8IYN6 164 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 METTL27Q8N6F8 245 aaPredicted RBP14.96□□□□□ -0.02
SNX6-202ENST00000396526 OR7G1Q8NGA0 311 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 SPRTNQ9H040 489 aaPredicted RBP14.96□□□□□ -0.02
SNX6-202ENST00000396526 DUSP15Q9H1R2 295 aaPredicted RBP14.96□□□□□ -0.02
SNX6-202ENST00000396526 OR10A5Q9H207 317 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 OR51E2Q9H255 320 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 SSR3Q9UNL2 185 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 RNF215Q9Y6U7 377 aa14.96□□□□□ -0.02
SNX6-202ENST00000396526 FITM1A5D6W6 292 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 CH25HO95992 272 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 TSPAN19P0C672 248 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 PRG2P13727 222 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 GLB1P16278 677 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 PAICSP22234 425 aaKnown RBP14.95□□□□□ -0.02
SNX6-202ENST00000396526 SEPHS1P49903 392 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 BTG2P78543 158 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 MLLT11Q13015 90 aaPredicted RBP14.95□□□□□ -0.02
SNX6-202ENST00000396526 OR6Q1Q8NGQ2 317 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 OTULINQ96BN8 352 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 VSTM2LQ96N03 204 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 DACH2Q96NX9 599 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 FBXO8Q9NRD0 319 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 MRPS18AQ9NVS2 196 aaKnown RBP14.95□□□□□ -0.02
SNX6-202ENST00000396526 SIDT1Q9NXL6 827 aaKnown RBP14.95□□□□□ -0.02
SNX6-202ENST00000396526 OSGIN1Q9UJX0 560 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 REV3LO60673 3130 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 ARHGAP33O14559 1287 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 HRO43593 1189 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 S1PR1P21453 382 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 ITGADQ13349 1161 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 RGS21Q2M5E4 152 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 NKAIN2Q5VXU1 208 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 ZC3H14Q6PJT7 736 aaKnown RBP14.95□□□□□ -0.02
SNX6-202ENST00000396526 OR52I1Q8NGK6 324 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 FANK1Q8TC84 345 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 SAMD8Q96LT4 415 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 HOXD1Q9GZZ0 328 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 ERVMER34-1Q9H9K5 563 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 ZBTB20Q9HC78 741 aaPredicted RBP14.95□□□□□ -0.02
SNX6-202ENST00000396526 UCKL1Q9NWZ5 548 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 CBLCQ9ULV8 474 aa14.95□□□□□ -0.02
SNX6-202ENST00000396526 CENPVL1A0A0U1RR11 272 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 J3QRK9 145 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 GABRA4P48169 554 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 INAQ16352 499 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 SNAP47Q5SQN1 464 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 DGAT2L6Q6ZPD8 337 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 BCDIN3DQ7Z5W3 292 aaKnown RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 LAPTM4BQ86VI4 370 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 GID4Q8IVV7 300 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 ZNF440Q8IYI8 595 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 C1orf216Q8TAB5 229 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 BPIFA2Q96DR5 249 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 HSPBAP1Q96EW2 488 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 OR1F2PQ96R84 312 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 FGF20Q9NP95 211 aaPredicted RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 GPR52Q9Y2T5 361 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 PCDHGA3Q9Y5H0 932 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 CLCA3PQ9Y6N3 262 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 POLR1CO15160 346 aaPredicted RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 CHP2O43745 196 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 HCN1O60741 890 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 MAOAP21397 527 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 OR1D5P58170 312 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 PRKCDQ05655 676 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 FUT7Q11130 342 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 HSDL2Q6YN16 418 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 OR8D4Q8NGM9 314 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 BRIX1Q8TDN6 353 aaKnown RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 CNOT9Q92600 299 aaKnown RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 IER2Q9BTL4 223 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 DPH1Q9BZG8 443 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 C6orf62Q9GZU0 229 aaPredicted RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 OR52D1Q9H346 318 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 OCEL1Q9H607 264 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 IGHV1OR21-1A0A087WYE8 117 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 BCKDHBP21953 392 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 ABCA7Q8IZY2 2146 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 ZNF527Q8NB42 609 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 RCBTB1Q8NDN9 531 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 GRHL3Q8TE85 626 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 CCDC59Q9P031 241 aaKnown RBP14.94□□□□□ -0.02
SNX6-202ENST00000396526 KCNE5Q9UJ90 142 aa14.94□□□□□ -0.02
SNX6-202ENST00000396526 SYNDIG1LA6NDD5 238 aa14.93□□□□□ -0.02
SNX6-202ENST00000396526 C17orf105B2RV13 164 aa14.93□□□□□ -0.02
SNX6-202ENST00000396526 KDM4EB2RXH2 506 aaPredicted RBP14.93□□□□□ -0.02
SNX6-202ENST00000396526 PIP5K1CO60331 668 aa14.93□□□□□ -0.02
SNX6-202ENST00000396526 CSO75390 466 aaKnown RBP14.93□□□□□ -0.02
SNX6-202ENST00000396526 HTR2AP28223 471 aa14.93□□□□□ -0.02
SNX6-202ENST00000396526 RBM34P42696 430 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms