RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FRRS1Q6ZNA5 592 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 HMGN2P46Q86SG4 172 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 CD163Q86VB7 1156 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 FAM26EQ8N5C1 309 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 OR5M9Q8NGP3 310 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 RELTQ969Z4 430 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 RCN3Q96D15 328 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 KLHDC3Q9BQ90 382 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 OR2B2Q9GZK3 357 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 PNPLA3Q9NST1 481 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 GID8Q9NWU2 228 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 TAS2R10Q9NYW0 307 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 SLC5A6Q9Y289 635 aa15.04■□□□□ -0
CXCL1-201ENST00000395761 HIVEP3Q5T1R4 2406 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 C15orf38-AP3S2A0A0A6YYH1 394 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 A0A1W2PQD3 144 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 OR14I1A6ND48 311 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 PRRG2O14669 202 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 AIM2O14862 343 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 UGT2B17O75795 530 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 ATP5HO75947 161 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 AGFG2O95081 481 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 H6PDO95479 791 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 CHRM4P08173 479 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 GUSBP08236 651 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 NUDT7P0C024 238 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 RNF224P0DH78 156 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 BMP7P18075 431 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 SRD5A2P31213 254 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 ANXA11P50995 505 aaKnown RBP15.03■□□□□ -0
CXCL1-201ENST00000395761 NFYCQ13952 458 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 RGNQ15493 299 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 ZNF141Q15928 474 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 MAPK14Q16539 360 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 GXYLT1Q4G148 440 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 PDZK1Q5T2W1 519 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 AP1ARQ63HQ0 302 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 C10orf111Q8N326 155 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 ZNF527Q8NB42 609 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 OR14L1PQ8NHC6 308 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 SH3YL1Q96HL8 342 aaPredicted RBP15.03■□□□□ -0
CXCL1-201ENST00000395761 TRNT1Q96Q11 434 aaKnown RBP15.03■□□□□ -0
CXCL1-201ENST00000395761 SAP130Q9H0E3 1048 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 IKZF5Q9H5V7 419 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 DKKL1Q9UK85 242 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 ACAD8Q9UKU7 415 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 LIPT1Q9Y234 373 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 RPH3AQ9Y2J0 694 aaPredicted RBP15.03■□□□□ -0
CXCL1-201ENST00000395761 WDR45Q9Y484 360 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 DTNAQ9Y4J8 743 aa15.03■□□□□ -0
CXCL1-201ENST00000395761 USP9XQ93008 2570 aaPredicted RBP15.03■□□□□ -0
CXCL1-201ENST00000395761 A0A1B0GUH1 482 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 CCL21O00585 134 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 KIAA0513O60268 411 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 HNRNPCL1O60812 293 aaKnown RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 TNFRSF21O75509 655 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 NR2F1P10589 423 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 MAGEA8P43361 318 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 CASP6P55212 293 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 DSCR4P56555 118 aaPredicted RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 DSTNP60981 165 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 ZNF117Q03924 483 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 ART3Q13508 389 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 TRMT5Q32P41 509 aaKnown RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 NDUFAF6Q330K2 333 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 DCST1Q5T197 706 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 C8orf82Q6P1X6 216 aaPredicted RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 ARSKQ6UWY0 536 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 NCCRP1Q6ZVX7 275 aaPredicted RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 DHDDSQ86SQ9 333 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 ZNF614Q8N883 585 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 PHOSPHO1Q8TCT1 267 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 SLC38A5Q8WUX1 472 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 SARAFQ96BY9 339 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 LRRC58Q96CX6 371 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 CGREF1Q99674 301 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 TIMP4Q99727 224 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 HOPXQ9BPY8 73 aaPredicted RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 UGT2B28Q9BY64 529 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 TRIM8Q9BZR9 551 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 QRSL1Q9H0R6 528 aaKnown RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 C1orf21Q9H246 121 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 SLC38A1Q9H2H9 487 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 RUBCNLQ9H714 662 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 POLE3Q9NRF9 147 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 CARD8Q9Y2G2 431 aa15.02■□□□□ -0
CXCL1-201ENST00000395761 MRPS18CQ9Y3D5 142 aaKnown RBP15.02■□□□□ -0
CXCL1-201ENST00000395761 DNAJC13O75165 2243 aa15.02□□□□□ -0.01
CXCL1-201ENST00000395761 FREM3P0C091 2139 aa15.02□□□□□ -0.01
CXCL1-201ENST00000395761 GTF3C1Q12789 2109 aa15.02□□□□□ -0.01
CXCL1-201ENST00000395761 SERINC4A6NH21 518 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 FXYD1O00168 92 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 BCKDKO14874 412 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 TFPTP0C1Z6 253 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 HK1P19367 917 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 CPA2P48052 419 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 B3GALT5-AS1P59052 145 aa15.01□□□□□ -0.01
CXCL1-201ENST00000395761 CRYZQ08257 329 aaKnown RBP15.01□□□□□ -0.01
CXCL1-201ENST00000395761 RUNDC3AQ59EK9 446 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms