RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 COX18Q8N8Q8 333 aa17.23■□□□□ 0.35
COL11A2-204ENST00000395194 LRRN4CLQ8ND94 238 aa17.23■□□□□ 0.35
COL11A2-204ENST00000395194 OR2V1Q8NHB1 315 aa17.23■□□□□ 0.35
COL11A2-204ENST00000395194 EPS8L3Q8TE67 593 aaKnown RBP17.23■□□□□ 0.35
COL11A2-204ENST00000395194 NUDT8Q8WV74 236 aa17.23■□□□□ 0.35
COL11A2-204ENST00000395194 HOXB13Q92826 284 aaPredicted RBP17.23■□□□□ 0.35
COL11A2-204ENST00000395194 GMPPAQ96IJ6 420 aaPredicted RBP17.23■□□□□ 0.35
COL11A2-204ENST00000395194 TUBB1Q9H4B7 451 aa17.23■□□□□ 0.35
COL11A2-204ENST00000395194 CADP27708 2225 aa17.23■□□□□ 0.35
COL11A2-204ENST00000395194 A0A087WZY1 265 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 NPIPA5A0A0B4J1W7 369 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 A0A0J9YW62 118 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 TMEM233B4DJY2 109 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 NPIPA7E9PJI5 369 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 SS18L1O75177 396 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-204ENST00000395194 IFI6P09912 130 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 NPIPA8P0DM63 369 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 HPGDP15428 266 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 IL11P20809 199 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 SFTPDP35247 375 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 PTH2RP49190 550 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 OCRLQ01968 901 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 CD226Q15762 336 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 RFTN2Q52LD8 501 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-204ENST00000395194 BEX5Q5H9J7 111 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 HBMQ6B0K9 141 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 ZNF704Q6ZNC4 412 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-204ENST00000395194 PLEKHM3Q6ZWE6 761 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 POC1BQ8TC44 478 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 ROBO4Q8WZ75 1007 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 CAVIN3Q969G5 261 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 FCRL1Q96LA6 429 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 GATA5Q9BWX5 397 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-204ENST00000395194 PLSCR4Q9NRQ2 329 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 GIMAP2Q9UG22 337 aa17.22■□□□□ 0.35
COL11A2-204ENST00000395194 SONP18583 2426 aaKnown RBP17.22■□□□□ 0.35
COL11A2-204ENST00000395194 FAM171A2A8MVW0 826 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 NPIPB8E9PQR5 432 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 SCDO00767 359 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 KLF4O43474 513 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 ALOX5P09917 674 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 ME2P23368 584 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 PSMA4P25789 261 aaKnown RBP17.21■□□□□ 0.35
COL11A2-204ENST00000395194 SHC1P29353 583 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 PRIM2P49643 509 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 PCLAFQ15004 111 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 DDIASQ8IXT1 998 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 OR6Y1Q8NGX8 325 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 KIF18AQ8NI77 898 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 FAM110BQ8TC76 370 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 ZBTB8AQ96BR9 441 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 PLPPR2Q96GM1 343 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 METTL2AQ96IZ6 378 aaKnown RBP17.21■□□□□ 0.35
COL11A2-204ENST00000395194 BDH2Q9BUT1 245 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 ACTR6Q9GZN1 396 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 GIN1Q9NXP7 522 aa17.21■□□□□ 0.35
COL11A2-204ENST00000395194 LSM1O15116 133 aaKnown RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 NTN1O95631 604 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 CHRNGP07510 517 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 NGFRP08138 427 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 NEFHP12036 1026 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 KRT4P19013 534 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 AGTR1P30556 359 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 FRKP42685 505 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 RAC1P63000 192 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 POU6F2P78424 691 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 FOXF1Q12946 379 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 PDE7AQ13946 482 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 LASP1Q14847 261 aaKnown RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 CPTPQ5TA50 214 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 KANK2Q63ZY3 851 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 PRSS57Q6UWY2 283 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 ESPNLQ6ZVH7 1005 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 B4GALNT2Q8NHY0 566 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 PHOSPHO1Q8TCT1 267 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 AGR3Q8TD06 166 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 CDS1Q92903 461 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 FAM120BQ96EK7 910 aaKnown RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 ZNF764Q96H86 408 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 KLHL15Q96M94 604 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 IQCGQ9H095 443 aaKnown RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 UBQLN4Q9NRR5 601 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 SIRT3Q9NTG7 399 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 ZCCHC3Q9NUD5 404 aaKnown RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 PAQR5Q9NXK6 330 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-204ENST00000395194 NTMQ9P121 344 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 DNAJC15Q9Y5T4 150 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 SNX8Q9Y5X2 465 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 RTTNQ86VV8 2226 aa17.2■□□□□ 0.34
COL11A2-204ENST00000395194 ADAMDEC1O15204 470 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 OIP5O43482 229 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 TBX19O60806 448 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 NUDT14O95848 222 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 CHEK2O96017 543 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 BCKDHAP12694 445 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 ZNF117Q03924 483 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 ZNF844Q08AG5 666 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 TSC22D1Q15714 1073 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 LILRA2Q8N149 483 aa17.19■□□□□ 0.34
COL11A2-204ENST00000395194 OR7A2PQ8NGA2 310 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms