RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 C4orf36Q96KX1 117 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 MCHR1Q99705 422 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 DIABLOQ9NR28 239 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 SLC23A2Q9UGH3 650 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 SLC7A7Q9UM01 511 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 LIPT1Q9Y234 373 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 A0A1W2PPL8 197 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 FKTNO75072 461 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 SOX30O94993 753 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 NOS3P29474 1203 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 UBE2MP61081 183 aaKnown RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 HSF2Q03933 536 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 TSPAN31Q12999 210 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 GPR68Q15743 365 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 PGGHGQ32M88 737 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 METAP1DQ6UB28 335 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF433Q8N7K0 673 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 RAD51AP1Q96B01 352 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 B3GNT4Q9C0J1 378 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 DLL4Q9NR61 685 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 BABAM2Q9NXR7 383 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 PPIL1Q9Y3C6 166 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 CENPVL1A0A0U1RR11 272 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ANKRD61A6NGH8 418 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 KDM4EB2RXH2 506 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 NDUFS4O43181 175 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 GSTM3P21266 225 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 BLVRAP53004 296 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZP1P60852 638 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 MESP2Q0VG99 397 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 NDUFA9Q16795 377 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 TMEM255AQ5JRV8 349 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 GPR139Q6DWJ6 353 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF782Q6ZMW2 699 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 OAFQ86UD1 273 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 OR4N5Q8IXE1 308 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 OR9A2Q8NGT5 310 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 PFN4Q8NHR9 129 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ELMOD3Q96FG2 381 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ICKQ9UPZ9 632 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 RCE1Q9Y256 329 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF593O00488 134 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 MID1O15344 667 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 SIX6O95475 246 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 OMPP47874 163 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 TAGLNQ01995 201 aaKnown RBP13.35□□□□□ -0.27
CLIP2-203ENST00000395060 TRAM2Q15035 370 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 CDC73Q6P1J9 531 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF793Q6ZN11 406 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 SLC51BQ86UW2 128 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 NUDT13Q86X67 352 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 RASGRP3Q8IV61 690 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 POGLUT1Q8NBL1 392 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 OR2T4Q8NH00 348 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 TIFAQ96CG3 184 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 SORCS2Q96PQ0 1159 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF649Q9BS31 505 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 MS4A8Q9BY19 250 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 KCNN2Q9H2S1 579 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 SLC35C2Q9NQQ7 365 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 ATG4BQ9Y4P1 393 aa13.35□□□□□ -0.27
CLIP2-203ENST00000395060 PRR23AA6NEV1 266 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 PRR23D1E9PI22 279 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-203ENST00000395060 ERI3O43414 337 aaKnown RBP13.34□□□□□ -0.27
CLIP2-203ENST00000395060 OR5F1O95221 314 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 THY1P04216 161 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 PRR23D2P0DMB1 279 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-203ENST00000395060 HK1P19367 917 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 LCN1P31025 176 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 CCR2P41597 374 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 TGM3Q08188 693 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 MELKQ14680 651 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 GSG1Q2KHT4 349 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 RNLSQ5VYX0 342 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 GET4Q7L5D6 327 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-203ENST00000395060 ADIPOR2Q86V24 386 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 SRFBP1Q8NEF9 429 aaKnown RBP13.34□□□□□ -0.27
CLIP2-203ENST00000395060 RPLP0P6Q8NHW5 317 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 ST8SIA2Q92186 375 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 RBPMSQ93062 196 aaKnown RBP13.34□□□□□ -0.27
CLIP2-203ENST00000395060 HHIPL1Q96JK4 782 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 AIF1LQ9BQI0 150 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 SLC25A18Q9H1K4 315 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 NT5DC2Q9H857 520 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 UCHL1P09936 223 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 ACSM4P0C7M7 580 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 PRG2P13727 222 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 THBS2P35442 1172 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 VEGFBP49765 207 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 ID2Q02363 134 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 TUSC1Q2TAM9 212 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 ACSM3Q53FZ2 586 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 HES5Q5TA89 166 aa13.34□□□□□ -0.27
CLIP2-203ENST00000395060 RASSF6Q6ZTQ3 369 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms