RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 POLE3Q9NRF9 147 aa18.08■□□□□ 0.49
SNCA-203ENST00000394986 MRGBPQ9NV56 204 aa18.08■□□□□ 0.49
SNCA-203ENST00000394986 LIPT1Q9Y234 373 aa18.08■□□□□ 0.49
SNCA-203ENST00000394986 CARD8Q9Y2G2 431 aa18.08■□□□□ 0.49
SNCA-203ENST00000394986 ZGRF1Q86YA3 2104 aa18.08■□□□□ 0.48
SNCA-203ENST00000394986 ZNF407Q9C0G0 2248 aa18.08■□□□□ 0.48
SNCA-203ENST00000394986 SHISA8B8ZZ34 492 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 PRRG2O14669 202 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 HCRTR2O43614 444 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 RNF224P0DH78 156 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 HK1P19367 917 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 MAGEA8P43361 318 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 MTPNP58546 118 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 RUNDC3AQ59EK9 446 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 RPS26P11Q5JNZ5 115 aaPredicted RBP18.07■□□□□ 0.48
SNCA-203ENST00000394986 LRRC74BQ6ZQY2 392 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 MISPQ8IVT2 679 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 OR5M1Q8NGP8 315 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 SLC38A5Q8WUX1 472 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 C1GALT1C1Q96EU7 318 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 TMEM19Q96HH6 336 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 SLC39A3Q9BRY0 314 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 CCDC106Q9BWC9 280 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 RAD21L1Q9H4I0 556 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 ACAD8Q9UKU7 415 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 VDAC3Q9Y277 283 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 SLC5A6Q9Y289 635 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 L3MBTL1Q9Y468 752 aa18.07■□□□□ 0.48
SNCA-203ENST00000394986 CLEC18AA5D8T8 446 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 OR14I1A6ND48 311 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 SERINC4A6NH21 518 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CLDN24A6NM45 220 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 MRASO14807 208 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CCDC22O60826 627 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 BCAS1O75363 584 aaPredicted RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 AGFG2O95081 481 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 TFPTP0C1Z6 253 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 BMP7P18075 431 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CASP6P55212 293 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CRYZQ08257 329 aaKnown RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 FADDQ13158 208 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 MAPRE2Q15555 327 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SNCA-203ENST00000394986 MMEL1Q495T6 779 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 GXYLT1Q4G148 440 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CLEC18BQ6UXF7 455 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 IFNEQ86WN2 208 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 TREML1Q86YW5 311 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 RPRMLQ8N4K4 120 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 FAM26EQ8N5C1 309 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CLEC18CQ8NCF0 446 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 SARAFQ96BY9 339 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 ANKRD27Q96NW4 1050 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 NPAS1Q99742 590 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 UGT2B28Q9BY64 529 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 PTGES2Q9H7Z7 377 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 USP9XQ93008 2570 aaPredicted RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 H3BNH8 94 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 GTPBP1O00178 669 aaKnown RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 CCL21O00585 134 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 BCKDKO14874 412 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 SLC22A2O15244 555 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 GUSBP08236 651 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 BMP2P12643 396 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 PPIBP23284 216 aaKnown RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 ADSLP30566 484 aaPredicted RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 B3GALT5-AS1P59052 145 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 CYLC2Q14093 348 aaPredicted RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 ZNF630Q2M218 657 aaPredicted RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 TRMT5Q32P41 509 aaKnown RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 GCNT6Q5T4J0 391 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 RAET1LQ5VY80 246 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 ZNF585AQ6P3V2 769 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 MTERF4Q7Z6M4 381 aaKnown RBP18.06■□□□□ 0.48
SNCA-203ENST00000394986 PIGWQ7Z7B1 504 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 TMCO5AQ8N6Q1 288 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 B4GALNT2Q8NHY0 566 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 RELTQ969Z4 430 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 SFXN2Q96NB2 322 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 TIMP4Q99727 224 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 MYLK2Q9H1R3 596 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 A4GALTQ9NPC4 353 aa18.06■□□□□ 0.48
SNCA-203ENST00000394986 EVPLLA8MZ36 301 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 FXYD1O00168 92 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 CYP7B1O75881 506 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 UBTFL6P0CB48 400 aaPredicted RBP18.05■□□□□ 0.48
SNCA-203ENST00000394986 UBL4AP11441 157 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 STARP49675 285 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 CRISP3P54108 245 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 GFRA1P56159 465 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 PLAURQ03405 335 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 FGFBP1Q14512 234 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 GANABQ14697 944 aaKnown RBP18.05■□□□□ 0.48
SNCA-203ENST00000394986 WLSQ5T9L3 541 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 VASNQ6EMK4 673 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 ABTB1Q969K4 478 aaPredicted RBP18.05■□□□□ 0.48
SNCA-203ENST00000394986 RCN3Q96D15 328 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 ALKBH4Q9NXW9 302 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 GMEB1Q9Y692 573 aa18.05■□□□□ 0.48
SNCA-203ENST00000394986 HIVEP3Q5T1R4 2406 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms