RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TMEM185BQ9H7F4 350 aa5.35□□□□□ -1.55
RFFL-202ENST00000394597 DCAF13Q9NV06 445 aaKnown RBP5.35□□□□□ -1.55
RFFL-202ENST00000394597 TAS2R16Q9NYV7 291 aa5.35□□□□□ -1.55
RFFL-202ENST00000394597 ZNF639Q9UID6 485 aa5.35□□□□□ -1.55
RFFL-202ENST00000394597 ZFR2Q9UPR6 939 aaKnown RBP5.35□□□□□ -1.55
RFFL-202ENST00000394597 HS3ST3A1Q9Y663 406 aa5.35□□□□□ -1.55
RFFL-202ENST00000394597 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CPED1A4D0V7 1026 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CREBL2O60519 120 aaPredicted RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 GATBO75879 557 aaKnown RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 ATG12O94817 140 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 SRFP11831 508 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 NAGAP17050 411 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 RHCEP18577 417 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ZP3P21754 424 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ADPRHP54922 357 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 HOXC5Q00444 222 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 TAP2Q03519 686 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 IHHQ14623 411 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 RPE65Q16518 533 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 TMEM196Q5HYL7 178 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 PIP5KL1Q5T9C9 394 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 SHEQ5VZ18 495 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CPZQ66K79 652 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 PLAG1Q6DJT9 500 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 FIGLAQ6QHK4 219 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CCDC190Q86UF4 302 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ADGRG3Q86Y34 549 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 DNAJC22Q8N4W6 341 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 FAM86B1Q8N7N1 296 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ZFP41Q8N8Y5 198 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 OR1M1Q8NGA1 313 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 C16orf78Q8WTQ4 265 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 EID2BQ96D98 161 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GIMAP5Q96F15 307 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 OR5M11Q96RB7 305 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 SECISBP2Q96T21 854 aaKnown RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 THAP7Q9BT49 309 aaPredicted RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 TSSK6Q9BXA6 273 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 BHLHE41Q9C0J9 482 aaPredicted RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 CDCP1Q9H5V8 836 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GORASP2Q9H8Y8 452 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 EMC7Q9NPA0 242 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 PRDM9Q9NQV7 894 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ZSCAN32Q9NX65 697 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 PSORS1C1Q9UIG5 152 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CBY1Q9Y3M2 126 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ENTPD2Q9Y5L3 495 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CACNG2Q9Y698 323 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 THSD7BQ9C0I4 1608 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 PCM1Q15154 2024 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 F5P12259 2224 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 KIR2DS5A0A0G2JLQ3 304 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 A0A0G2JNG1 304 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GRXCR2A6NFK2 248 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 TMEM202A6NGA9 273 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 LRRN3E7EW58 273 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 H0YIV9 168 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 KIR2DS3K7RE56 304 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ARNTLO00327 626 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 RTCAO00442 366 aaKnown RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 SCAMP2O15127 329 aaKnown RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 ICAM2P13598 275 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ZNF35P13682 527 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 DRD2P14416 443 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 UQCRC2P22695 453 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ITGA3P26006 1051 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GIFP27352 417 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GGT2P36268 569 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 OR1E2P47887 323 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 PSPHP78330 225 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 CDK6Q00534 326 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 HHEXQ03014 270 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 BAMBIQ13145 260 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 KIR2DS5Q14953 304 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 VMACQ2NL98 169 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GTDC1Q4AE62 458 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 MINDY4Q4G0A6 757 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 IER5LQ5T953 404 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 METRNLQ641Q3 311 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 TMEM88Q6PEY1 159 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 Q6ZSR9 355 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 NLRC3Q7RTR2 1065 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 GLCCI1Q86VQ1 547 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 IL17RCQ8NAC3 791 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 OR56A3Q8NH54 315 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 WDR48Q8TAF3 677 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 LRRC3BQ96PB8 259 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 ALOXE3Q9BYJ1 711 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 TGIF2Q9GZN2 237 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 SLITRK2Q9H156 845 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 LRRN3Q9H3W5 708 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 IL21RQ9HBE5 538 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
RFFL-202ENST00000394597 MRTO4Q9UKD2 239 aaKnown RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 DIMT1Q9UNQ2 313 aaKnown RBP5.34□□□□□ -1.55
RFFL-202ENST00000394597 NAALAD2Q9Y3Q0 740 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms