RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ABHD14A-ACY1A0A1B0GW23 586 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 KDM4EB2RXH2 506 aaPredicted RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 H0YIV9 168 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 EIF1BO60739 113 aaKnown RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 OR12D1P0DN82 309 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 IFNGR1P15260 489 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 EIF1P41567 113 aaKnown RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 TLE2Q04725 743 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 ZSWIM7Q19AV6 140 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 ASTLQ6HA08 431 aaPredicted RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 FIP1L1Q6UN15 594 aaKnown RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 Q6ZTK2 550 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 OR6V1Q8N148 313 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 KLHL36Q8N4N3 616 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 TRAM1L1Q8N609 369 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 FBXO15Q8NCQ5 510 aaPredicted RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 OR2A12Q8NGT7 310 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 RGMAQ96B86 450 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 DEFB118Q96PH6 123 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 SLC6A20Q9NP91 592 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 SLC9A8Q9Y2E8 581 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 C2orf92A0A1B0GVN3 265 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 CD8B2A6NJW9 211 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 LRRN3E7EW58 273 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 H1F0P07305 194 aaKnown RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 CD8BP10966 210 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 CELP19835 753 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 CD22P20273 847 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 PRKAR1BP31321 381 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 GDI2P50395 445 aaKnown RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 GPR143P51810 404 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 DOC2AQ14183 400 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 GINS1Q14691 196 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 GRHL2Q6ISB3 625 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 UQCC3Q6UW78 93 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 TMPRSS9Q7Z410 1059 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 HSD11B1LQ7Z5J1 315 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 RNF175Q8N4F7 328 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 SLC44A3Q8N4M1 653 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 LINC00471Q8N535 108 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 TCEAL4Q96EI5 215 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 MTERF1Q99551 399 aaKnown RBP17.63■□□□□ 0.41
HOXC6-202ENST00000394331 SLC35A5Q9BS91 424 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 BTBD1Q9H0C5 482 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 LRRN3Q9H3W5 708 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 BRF2Q9HAW0 419 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 FBXL3Q9UKT7 428 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 BRCA2P51587 3418 aa17.63■□□□□ 0.41
HOXC6-202ENST00000394331 OBSL1O75147 1896 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 ARHGEF33A8MVX0 844 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 HYAL3O43820 417 aaPredicted RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 PRAMEF2O60811 474 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 GLAP06280 429 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 C8AP07357 584 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 ZNF660Q6AZW8 331 aaPredicted RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 KIAA1161Q6NSJ0 714 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 SLC39A5Q6ZMH5 540 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 Q6ZVL8 140 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 C12orf45Q8N5I9 185 aaPredicted RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 IQCF1Q8N6M8 205 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 OR11G2Q8NGC1 345 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 TCEAL3Q969E4 200 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 TOX2Q96NM4 488 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 PKP4Q99569 1192 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 PDCD10Q9BUL8 212 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 PLXNB3Q9ULL4 1909 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 NAP1L6A6NFF2 107 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 ATG12O94817 140 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 CATP04040 527 aaKnown RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 CD79BP40259 229 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 DDX39BQ13838 428 aaKnown RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 TMEM44Q2T9K0 475 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 SYTL3Q4VX76 610 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 AGTRAPQ6RW13 159 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 TMEM159Q96B96 161 aa17.62■□□□□ 0.41
HOXC6-202ENST00000394331 NARS2Q96I59 477 aaKnown RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 ZNF768Q9H5H4 540 aaKnown RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 NFKBIL1Q9UBC1 381 aaPredicted RBP17.62■□□□□ 0.41
HOXC6-202ENST00000394331 NEDD8-MDP1E9PL57 170 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 CD3GP09693 182 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ITGB8P26012 769 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 RAB8AP61006 207 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ERVK-25P63136 954 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 NAE1Q13564 534 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 SF1Q15637 639 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 SFXN4Q6P4A7 337 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ANGPTL8Q6UXH0 198 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 GLDNQ6ZMI3 551 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ZNF852Q6ZMS4 543 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 KLHDC8AQ8IYD2 350 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 GLYATL2Q8WU03 294 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 FAM83CQ9BQN1 747 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 OR2AG2A6NM03 316 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 E7EQ34 232 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 FKTNO75072 461 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 IGHA1P01876 353 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 RLN2P04090 185 aa17.61■□□□□ 0.41
HOXC6-202ENST00000394331 ACAA1P09110 424 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 BTF3P20290 206 aaKnown RBP17.61■□□□□ 0.41
HOXC6-202ENST00000394331 MAPK9P45984 424 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms