RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ZBTB18Q99592 522 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 TM9SF2Q99805 663 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 CLCF1Q9UBD9 225 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 ADGRG4Q8IZF6 3080 aa27.77■■■□□ 2.04
CMTM4-202ENST00000394106 DUXAA6NLW8 204 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 LINC01387J3KSC0 135 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 IL12AP29459 219 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 SSTR2P30874 369 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 ZNF614Q8N883 585 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 MAELQ96JY0 434 aaKnown RBP27.76■■■□□ 2.03
CMTM4-202ENST00000394106 UCN2Q96RP3 112 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 OR51I1Q9H343 314 aa27.76■■■□□ 2.03
CMTM4-202ENST00000394106 H0YC42 278 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 HCRTR2O43614 444 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 UQCRC1P31930 480 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 CHI3L1P36222 383 aaPredicted RBP27.75■■■□□ 2.03
CMTM4-202ENST00000394106 ASCL1P50553 236 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 ZNF41P51814 821 aaPredicted RBP27.75■■■□□ 2.03
CMTM4-202ENST00000394106 SUCLG1P53597 346 aaKnown RBP27.75■■■□□ 2.03
CMTM4-202ENST00000394106 TPD52P55327 224 aaPredicted RBP27.75■■■□□ 2.03
CMTM4-202ENST00000394106 B4GALNT2Q8NHY0 566 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 LRRC8CQ8TDW0 803 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 ACTRT2Q8TDY3 377 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 INTS12Q96CB8 462 aaKnown RBP27.75■■■□□ 2.03
CMTM4-202ENST00000394106 CCDC115Q96NT0 180 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 OR52E6Q96RD3 313 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 SDF2Q99470 211 aa27.75■■■□□ 2.03
CMTM4-202ENST00000394106 A0A087WZY1 265 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 DIAPH2O60879 1101 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 IDO1P14902 403 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 H2AFXP16104 143 aaPredicted RBP27.74■■■□□ 2.03
CMTM4-202ENST00000394106 OPRM1P35372 400 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 ATP12AP54707 1039 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 DLX5P56178 289 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 FOXF2Q12947 444 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 TMEM44Q2T9K0 475 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 KLHL26Q53HC5 615 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.74■■■□□ 2.03
CMTM4-202ENST00000394106 TNFAIP8L2Q6P589 184 aaPredicted RBP27.74■■■□□ 2.03
CMTM4-202ENST00000394106 C16orf62Q7Z3J2 963 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 P4HA3Q7Z4N8 544 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 GCNT2Q8N0V5 402 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 OR52B2Q96RD2 323 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 SH3GL2Q99962 352 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 KLHDC3Q9BQ90 382 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 SLC35A5Q9BS91 424 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 MED17Q9NVC6 651 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 BTNL2Q9UIR0 455 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 USH1CQ9Y6N9 552 aa27.74■■■□□ 2.03
CMTM4-202ENST00000394106 EEF1E1-BLOC1S5C9J1V9 151 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 H3BNH8 94 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 ZNF195O14628 629 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 EEF1E1O43324 174 aaKnown RBP27.73■■■□□ 2.03
CMTM4-202ENST00000394106 RCBTB2O95199 551 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 PGRP06401 933 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 CLDN15P56746 228 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 CLDN20P56880 219 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 EEFSECP57772 596 aaKnown RBP27.73■■■□□ 2.03
CMTM4-202ENST00000394106 ZNF117Q03924 483 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 TLE4Q04727 773 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 SNTB1Q13884 538 aaKnown RBP27.73■■■□□ 2.03
CMTM4-202ENST00000394106 SAXO2Q658L1 398 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 OLIG3Q7RTU3 272 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 MTERF4Q7Z6M4 381 aaKnown RBP27.73■■■□□ 2.03
CMTM4-202ENST00000394106 CHDHQ8NE62 594 aaPredicted RBP27.73■■■□□ 2.03
CMTM4-202ENST00000394106 DYDC1Q8WWB3 177 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 C14orf79Q96F83 325 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 LRRC46Q96FV0 321 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 PANX1Q96RD7 426 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 EXD2Q9NVH0 621 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 AP4B1Q9Y6B7 739 aa27.73■■■□□ 2.03
CMTM4-202ENST00000394106 GTPBP1O00178 669 aaKnown RBP27.72■■■□□ 2.03
CMTM4-202ENST00000394106 OIP5O43482 229 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 TGM6O95932 706 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 AK1P00568 194 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 OR12D1P0DN82 309 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 ZNF17P17021 662 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 GPR68Q15743 365 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 PLPPR5Q32ZL2 321 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 PDCD4Q53EL6 469 aaKnown RBP27.72■■■□□ 2.03
CMTM4-202ENST00000394106 MIPOL1Q8TD10 442 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 XAGE5Q8WWM1 108 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 RAB8BQ92930 207 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 ZBTB8AQ96BR9 441 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 NEURL3Q96EH8 262 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 C7orf26Q96N11 449 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 ZFP3Q96NJ6 502 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 NPAS1Q99742 590 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 INPP5KQ9BT40 448 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 PINK1Q9BXM7 581 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 VIPAS39Q9H9C1 493 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 CARD8Q9Y2G2 431 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 DTNAQ9Y4J8 743 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 ABCA12Q86UK0 2595 aa27.72■■■□□ 2.03
CMTM4-202ENST00000394106 SLC22A20A6NK97 555 aa27.71■■■□□ 2.03
CMTM4-202ENST00000394106 HMGB1P1B2RPK0 211 aaPredicted RBP27.71■■■□□ 2.03
CMTM4-202ENST00000394106 NPIPB9F8W1W9 429 aa27.71■■■□□ 2.03
CMTM4-202ENST00000394106 SYT5O00445 386 aa27.71■■■□□ 2.03
CMTM4-202ENST00000394106 UBDO15205 165 aa27.71■■■□□ 2.03
CMTM4-202ENST00000394106 STX11O75558 287 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms