RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ZBED6CLQ96FA7 236 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 KLHL15Q96M94 604 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 TRAF4Q9BUZ4 470 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 TRIM2Q9C040 744 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 GSTO2Q9H4Y5 243 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ESRP2Q9H6T0 727 aaKnown RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 GRPEL1Q9HAV7 217 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 C3orf14Q9HBI5 128 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 YAE1D1Q9NRH1 226 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 POLR3HQ9Y535 204 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 A0A1W2PP18 115 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 POC1B-GALNT4F8VUJ3 575 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 NDUFB5O43674 189 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 NTN1O95631 604 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 CD8AP01732 235 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 ACP2P11117 423 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 TAC1P20366 129 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 IMPDH1P20839 514 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 ATP5F1P24539 256 aaPredicted RBP13.66□□□□□ -0.22
CHMP3-202ENST00000393773 ADH6P28332 368 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 BSPH1Q075Z2 132 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 FAPQ12884 760 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 GLE1Q53GS7 698 aaKnown RBP13.66□□□□□ -0.22
CHMP3-202ENST00000393773 SFRP5Q5T4F7 317 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 CPTPQ5TA50 214 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 IKBIPQ70UQ0 350 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 ZNF551Q7Z340 670 aaPredicted RBP13.66□□□□□ -0.22
CHMP3-202ENST00000393773 NUFIP2Q7Z417 695 aaKnown RBP13.66□□□□□ -0.22
CHMP3-202ENST00000393773 DTX2Q86UW9 622 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 TRABD2AQ86V40 505 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 EXOC3L1Q86VI1 746 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 GPR151Q8TDV0 419 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 ROBO4Q8WZ75 1007 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 GIMAP5Q96F15 307 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 SH3YL1Q96HL8 342 aaPredicted RBP13.66□□□□□ -0.22
CHMP3-202ENST00000393773 FBXO34Q9NWN3 711 aa13.66□□□□□ -0.22
CHMP3-202ENST00000393773 GDF2Q9UK05 429 aaPredicted RBP13.66□□□□□ -0.22
CHMP3-202ENST00000393773 UBFD1O14562 309 aaKnown RBP13.65□□□□□ -0.22
CHMP3-202ENST00000393773 PHF1O43189 567 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-202ENST00000393773 LINGO3P0C6S8 592 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 ME2P23368 584 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 IL32P24001 234 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 ELK4P28324 431 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 PRIM2P49643 509 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 PRKAA2P54646 552 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 FOXF1Q12946 379 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 HSPB3Q12988 150 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 CD226Q15762 336 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 CHRFAM7AQ494W8 412 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 C6orf52Q5T4I8 152 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 CEP112Q8N8E3 955 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 FAM76AQ8TAV0 307 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 FBXO30Q8TB52 745 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 PIWIL2Q8TC59 973 aaKnown RBP13.65□□□□□ -0.22
CHMP3-202ENST00000393773 FAM110BQ8TC76 370 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 OSTF1Q92882 214 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 HDHD5Q9BXW7 423 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 COQ10BQ9H8M1 238 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 HHATLQ9HCP6 504 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 SNX8Q9Y5X2 465 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.224e-7■■■■□ 26.6
CHMP3-202ENST00000393773 MALRD1Q5VYJ5 2156 aa13.65□□□□□ -0.22
CHMP3-202ENST00000393773 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 CCDC151A5D8V7 595 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 DPRXA6NFQ7 191 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 A8MV72 311 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 PDPK1O15530 556 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 KCNK2O95069 426 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 F12P00748 615 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 SNRPAP09012 282 aaKnown RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 PRPS2P11908 318 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 GCAP28676 217 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 ECHS1P30084 290 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 SFTPDP35247 375 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 RNPS1Q15287 305 aaKnown RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 EXOSC6Q5RKV6 272 aaKnown RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 TMEM201Q5SNT2 666 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 PDSS1Q5T2R2 415 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 SLC22A9Q8IVM8 553 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 TUSC5Q8IXB3 177 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 LILRA2Q8N149 483 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 CDRT4Q8N9R6 151 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 KISS1RQ969F8 398 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 CPNE4Q96A23 557 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 CIDECQ96AQ7 238 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 ZNF764Q96H86 408 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-202ENST00000393773 EGLN2Q96KS0 407 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 HS6ST2Q96MM7 605 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 MS4A4EQ96PG1 132 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 GRIP2Q9C0E4 1043 aa13.64□□□□□ -0.23
CHMP3-202ENST00000393773 BARX1Q9HBU1 254 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms