RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GYG2O15488 501 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 PEX1O43933 1283 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 ADH6P28332 368 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 GPAT3Q53EU6 434 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 CCNJQ5T5M9 372 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 ZNF836Q6ZNA1 936 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 LINC00696Q6ZRV3 163 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 OR52P1PQ8NH57 321 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 PHF10Q8WUB8 498 aaKnown RBP12.11□□□□□ -0.47
USP44-202ENST00000393091 MAL2Q969L2 176 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 TAMM41Q96BW9 452 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 ARMC7Q9H6L4 198 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 ITPR1Q14643 2758 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 A6NL46 340 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 CBR3O75828 277 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 IGF2P01344 180 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 P2RX1P51575 399 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 SELENOWP63302 87 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 GK3PQ14409 553 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 LARS2Q15031 903 aaKnown RBP12.1□□□□□ -0.47
USP44-202ENST00000393091 SLC6A19Q695T7 634 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 TIGD3Q6B0B8 471 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ZFP64Q9NPA5 681 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 BOKQ9UMX3 212 aaPredicted RBP12.1□□□□□ -0.47
USP44-202ENST00000393091 APC2O95996 2303 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 AQP12BA6NM10 295 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 H3BNH8 94 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ANGPTL1O95841 491 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 MAP2K6P52564 334 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 KCNJ10P78508 379 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 EPS8Q12929 822 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 SPINK14Q6IE38 97 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 PIWIL3Q7Z3Z3 882 aaKnown RBP12.1□□□□□ -0.47
USP44-202ENST00000393091 SZRD1Q7Z422 152 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 PLCZ1Q86YW0 608 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 AQP12AQ8IXF9 295 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 PRR22Q8IZ63 422 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 PAPD5Q8NDF8 572 aaKnown RBP12.1□□□□□ -0.47
USP44-202ENST00000393091 JADE3Q92613 823 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ZNF703Q9H7S9 590 aaPredicted RBP12.1□□□□□ -0.47
USP44-202ENST00000393091 ANAPC2Q9UJX6 822 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.1□□□□□ -0.47
USP44-202ENST00000393091 C5orf58C9J3I9 102 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ARMC8Q8IUR7 673 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 GPR32P1Q8NGA4 272 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 PLA2G3Q9NZ20 509 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 RPS6KA6Q9UK32 745 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ACAD8Q9UKU7 415 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 ZNF232Q9UNY5 417 aa12.1□□□□□ -0.47
USP44-202ENST00000393091 NCOR2Q9Y618 2525 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ZNF264O43296 627 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 HCN1O60741 890 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 UBL4AP11441 157 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 SRD5A2P31213 254 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 PDZK1Q5T2W1 519 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 OR5W2Q8NH69 310 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 FBXO30Q8TB52 745 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ST8SIA1Q92185 356 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 MKLN1Q9UL63 735 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 PTPRQQ9UMZ3 2332 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 CENPVL1A0A0U1RR11 272 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 THRBP10828 461 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 UMPSP11172 480 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 FKBP2P26885 142 aaKnown RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 ACAA2P42765 397 aaKnown RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 MAGEA2P43356 314 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 CD226Q15762 336 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 NNATQ16517 81 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 IQCCQ4KMZ1 466 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ANGPTL8Q6UXH0 198 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ZNF550Q7Z398 422 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ULK2Q8IYT8 1036 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 CATSPER1Q8NEC5 780 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 GPR119Q8TDV5 335 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ZG16BQ96DA0 208 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 DHRS1Q96LJ7 313 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 TRIM8Q9BZR9 551 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ADAM19Q9H013 955 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 TUBA8Q9NY65 449 aaPredicted RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 TESQ9UGI8 421 aaKnown RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 BAG5Q9UL15 447 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 SAMD4AQ9UPU9 718 aaKnown RBP12.09□□□□□ -0.47
USP44-202ENST00000393091 NTNG1Q9Y2I2 539 aa12.09□□□□□ -0.47
USP44-202ENST00000393091 ARPC2O15144 300 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 PSMA4P25789 261 aaKnown RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 ELK4P28324 431 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 ZNF136P52737 540 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 ZNF117Q03924 483 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 PLEKHN1Q494U1 663 aaPredicted RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 UTP4Q969X6 686 aaKnown RBP12.08□□□□□ -0.48
USP44-202ENST00000393091 C1GALT1C1Q96EU7 318 aa12.08□□□□□ -0.48
USP44-202ENST00000393091 DOHHQ9BU89 302 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms