RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TMEM74BQ9NUR3 256 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 POT1Q9NUX5 634 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 SLC35F4A4IF30 521 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 SCN2BO60939 215 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 ARSBP15848 533 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 UGT2B7P16662 529 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 TYRP1P17643 537 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 PRPS1L1P21108 318 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 S100A3P33764 101 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 HHEXQ03014 270 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 TIGD6Q17RP2 521 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 PRSS53Q2L4Q9 553 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 FAM76BQ5HYJ3 339 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 RASSF6Q6ZTQ3 369 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 UBE2J2Q8N2K1 259 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 ZC3HAV1LQ96H79 300 aaKnown RBP17.73■□□□□ 0.43
CCDC50-202ENST00000392456 ITCHQ96J02 903 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 NSMCE2Q96MF7 247 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 TMEM184CQ9NVA4 438 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 ASXL3Q9C0F0 2248 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 KIR2DS5A0A0G2JLQ3 304 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 A0A0G2JNG1 304 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 KIR2DS3K7RE56 304 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 FAM20BO75063 409 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 PRF1P14222 555 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 PVRP15151 417 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 ABATP80404 500 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 PWP1Q13610 501 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 KIR2DS5Q14953 304 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.72■□□□□ 0.437e-7■■■□□ 18.6
CCDC50-202ENST00000392456 DEFB133Q30KQ1 61 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 GLCCI1Q86VQ1 547 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 OR11H4Q8NGC9 324 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 WDFY2Q96P53 400 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 MED18Q9BUE0 208 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 ASB4Q9Y574 426 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 AGRPO00253 132 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 BCAT2O15382 392 aaPredicted RBP17.72■□□□□ 0.43
CCDC50-202ENST00000392456 RAP2AP10114 183 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 TDGF1P13385 188 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 COX7A2P14406 83 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 CMPK1P30085 196 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 BSGP35613 385 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 KCNJ5P48544 419 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 TAS2R50P59544 299 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 ZNF528Q3MIS6 628 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 ZNF385BQ569K4 471 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 SVOPLQ8N434 492 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 RSC1A1Q92681 617 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 EDAQ92838 391 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 HRASLS2Q9NWW9 162 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 EPHA6Q9UF33 1036 aa17.72■□□□□ 0.43
CCDC50-202ENST00000392456 ARID1BQ8NFD5 2236 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-202ENST00000392456 A0A1B0GVT2 93 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 TRBC2A0A5B9 178 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 LGALS8O00214 317 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 PTPN6P29350 595 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 PI4KAP42356 2102 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 CLDN20P56880 219 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 OR4D2P58180 307 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 ERV3-1Q14264 604 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 SMN1Q16637 294 aaKnown RBP17.71■□□□□ 0.43
CCDC50-202ENST00000392456 DMRTC2Q8IXT2 367 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-202ENST00000392456 CLECL1Q8IZS7 167 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 C10orf111Q8N326 155 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 KLHL36Q8N4N3 616 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 C16orf78Q8WTQ4 265 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 IPCEF1Q8WWN9 437 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-202ENST00000392456 CHCHD6Q9BRQ6 235 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 NIT2Q9NQR4 276 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 PTTG3PQ9NZH4 202 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 MIOXQ9UGB7 285 aa17.71■□□□□ 0.43
CCDC50-202ENST00000392456 TMEFF2Q9UIK5 374 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-202ENST00000392456 LRIT2A6NDA9 550 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 AKAP8O43823 692 aaKnown RBP17.71■□□□□ 0.42
CCDC50-202ENST00000392456 CTSVO60911 334 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 GPX5O75715 221 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 KIR3DL1P43629 444 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 ALDH9A1P49189 494 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF763Q0D2J5 394 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 GLYR1Q49A26 553 aaPredicted RBP17.71■□□□□ 0.42
CCDC50-202ENST00000392456 FBXO42Q6P3S6 717 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 PAQR7Q86WK9 346 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 DUSP18Q8NEJ0 188 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.42
CCDC50-202ENST00000392456 OR1M1Q8NGA1 313 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 UCN3Q969E3 161 aa17.71■□□□□ 0.42
CCDC50-202ENST00000392456 SCAMP2O15127 329 aaKnown RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 KIAA0513O60268 411 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 KLK3P07288 261 aaPredicted RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 GPX4P36969 197 aaPredicted RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 RIDAP52758 137 aaKnown RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 HSF2Q03933 536 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 KIR2DS3Q14952 304 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 ELOCQ15369 112 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 FCRL6Q6DN72 434 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 RGS7BPQ6MZT1 257 aaPredicted RBP17.7■□□□□ 0.42
CCDC50-202ENST00000392456 RNF130Q86XS8 419 aa17.7■□□□□ 0.42
CCDC50-202ENST00000392456 CCDC116Q8IYX3 515 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms