RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 NPIPB7O75200 414 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 NME6O75414 186 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 STK17BO94768 372 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 KIAA0754O94854 1291 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 JCHAINP01591 159 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 IGHV3-48P01763 117 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CD5P06127 495 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 MRPL3P09001 348 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 GIPP09681 153 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 GNSP15586 552 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 GCFC2P16383 781 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SERPINA2P20848 420 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 NLRP11P59045 1033 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 PRPS1P60891 318 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CSNK1G2P78368 415 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 MRPS6P82932 125 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CHRNB3Q05901 458 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SLAQ13239 276 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 UNC119Q13432 240 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 LY6EQ16553 131 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 UBE2SQ16763 222 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 TYSND1Q2T9J0 566 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 ACSF3Q4G176 576 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 C5orf47Q569G3 176 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 FAM133BQ5BKY9 247 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 DNAJC21Q5F1R6 531 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 GLRA4Q5JXX5 417 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 PNCKQ6P2M8 343 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 LEG1Q6P5S2 330 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 BTNL3Q6UXE8 466 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SYT10Q6XYQ8 523 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 BNIPLQ7Z465 357 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 C6orf120Q7Z4R8 191 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 NET1Q7Z628 596 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 GLRX5Q86SX6 157 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 YRDCQ86U90 279 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SERPINA9Q86WD7 417 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 C6orf223Q8N319 242 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 LRRC17Q8N6Y2 441 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 WDR36Q8NI36 951 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC5A11Q8WWX8 675 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CHCHD10Q8WYQ3 142 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 STARD8Q92502 1023 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 PHYHIPQ92561 330 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SMARCD2Q92925 531 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 ERP27Q96DN0 273 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 EPSTI1Q96J88 318 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 NAP1L3Q99457 506 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 RASL11BQ9BPW5 248 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 NRIP2Q9BQI9 281 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 ADPGKQ9BRR6 497 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 FEM1AQ9BSK4 669 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CRNKL1Q9BZJ0 848 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 PLA2G2FQ9BZM2 168 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC5A7Q9GZV3 580 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 DDX47Q9H0S4 455 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 IFI27L2Q9H2X8 130 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 COG4Q9H9E3 785 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CAB39LQ9H9S4 337 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 MEPEQ9NQ76 525 aaPredicted RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 PIGVQ9NUD9 493 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 COMMD8Q9NX08 183 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 MBD2Q9UBB5 411 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 TBX21Q9UL17 535 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 UBQLN1Q9UMX0 589 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 EIF3LQ9Y262 564 aaKnown RBP0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 ASF1AQ9Y294 204 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 MAB21L2Q9Y586 359 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 A0A096LNJ9 63 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 A0A0A6YYC8 382 aaPredicted RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 KIR2DS1A0A191URI9 304 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ESYT2A0FGR8 921 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF320A2RRD8 509 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 A4D1N5 150 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 PSMB11A5LHX3 300 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 H3BMH7 237 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 H3BTX0 84 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 I3L1I5 382 aaPredicted RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 K7ENP7 123 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 SULT2B1O00204 365 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 TLR4O00206 839 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 LAD1O00515 517 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 TM9SF1O15321 606 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 TIMM44O43615 452 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 JAK2O60674 1132 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 SCRG1O75711 98 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 LALBAP00709 142 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 IGKV1D-16P01601 117 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 P04436 131 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 RNH1P13489 461 aaKnown RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 IGFBP3P17936 291 aaPredicted RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 RCC1P18754 421 aaPredicted RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CALB2P22676 271 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 UQCRC2P22695 453 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 BDNFP23560 247 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 NMT1P30419 496 aaKnown RBP0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CTRLP40313 264 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 CNTN2Q02246 1040 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ZP4Q12836 540 aa0.72□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF154Q13106 437 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms