RNA–Protein interactions for RNA: ENST00000390728.2

MIR548U-201, Transcript of microRNA 548u, humanhuman

BASIC

Gene MIR548U, Length 81 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548U-201ENST00000390728 ZNF806P0C7X5 589 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 TDGF1P13385 188 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 TCP1P17987 556 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 NPR2P20594 1047 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 CYP3A5P20815 502 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 CSRP1P21291 193 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 MAN1A1P33908 653 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 GCKP35557 465 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 TDGF1P3P51864 188 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 ESRRGP62508 458 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 MC1RQ01726 317 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 GABPAQ06546 454 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 SMARCB1Q12824 385 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 KRT32Q14532 448 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 MEA1Q16626 185 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 NRF1Q16656 503 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 TMEM183BQ1AE95 376 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 ZNF181Q2M3W8 571 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 RFX4Q33E94 735 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LRRC73Q5JTD7 316 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 PM20D1Q6GTS8 502 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LYPD2Q6UXB3 125 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 Q6ZRN7 208 aaPredicted RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 RBPMS2Q6ZRY4 209 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 DNM1P46Q6ZS02 220 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 PARGQ86W56 976 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 MFSD6LQ8IWD5 586 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 TMEM183AQ8IXX5 376 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 PEX5LQ8IYB4 626 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 ZNF679Q8IYX0 411 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LINC00518Q8N0U6 118 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 SIX6OS1Q8N1H7 587 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LRRC52Q8N7C0 313 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 CCNYQ8ND76 341 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 APPL2Q8NEU8 664 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 OR4F17Q8NGA8 305 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 ACER1Q8TDN7 264 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 MRPS27Q92552 414 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 HGDQ93099 445 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 L3HYPDHQ96EM0 354 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 COG3Q96JB2 828 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 OR4F4Q96R69 305 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 KATNB1Q9BVA0 655 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 CCDC106Q9BWC9 280 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 KRTAP2-4Q9BYR9 128 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 KRTAP2-1Q9BYU5 128 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 POLR2J2Q9GZM3 115 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 POLR2J3Q9H1A7 115 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 UNC45AQ9H3U1 944 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 CAB39LQ9H9S4 337 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LMAN1LQ9HAT1 526 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 PARP11Q9NR21 331 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 EIF2B3Q9NR50 452 aaKnown RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 KLHL28Q9NXS3 571 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LUZP4Q9P127 313 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 LHX3Q9UBR4 397 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 AASSQ9UDR5 926 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 KCNN3Q9UGI6 736 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 BTNL2Q9UIR0 455 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 ZNF215Q9UL58 517 aaPredicted RBP-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 EXOC7Q9UPT5 735 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 PDS5BQ9NTI5 1447 aa-0.65□□□□□ -2.51
MIR548U-201ENST00000390728 ZFC3H1O60293 1989 aaKnown RBP-0.66□□□□□ -2.51
MIR548U-201ENST00000390728 THADAQ6YHU6 1953 aa-0.66□□□□□ -2.51
MIR548U-201ENST00000390728 PLAC8L1A1L4L8 177 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 M0R296 226 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 EPB41L2O43491 1005 aaKnown RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 HCRTR1O43613 425 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 TADA2AO75478 443 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 CCNE2O96020 404 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 LDHAP00338 332 aaKnown RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 PGK2P07205 417 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 GIPP09681 153 aaPredicted RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 ALPPL2P10696 532 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 ALOX12P18054 663 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 STK19P49842 368 aaPredicted RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 CSE1LP55060 971 aaKnown RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 PTENP60484 403 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 DCAF7P61962 342 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 RPS4XP62701 263 aaKnown RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 RBX1P62877 108 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 PLOD1Q02809 727 aaPredicted RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 MZT1Q08AG7 82 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 DDX10Q13206 875 aaKnown RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 ARFRP1Q13795 201 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 FAM53BQ14153 422 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 SLC5A12Q1EHB4 618 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 TCHHL1Q5QJ38 904 aaPredicted RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 SIGLEC15Q6ZMC9 328 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 BRINP3Q76B58 766 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 NT5DC3Q86UY8 548 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 VRK2Q86Y07 508 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 LGI3Q8N145 548 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 OCC1Q8TAD7 63 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 SPATA18Q8TC71 538 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 NDRG1Q92597 394 aaKnown RBP-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 FAM46BQ96A09 425 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 RNF157Q96PX1 679 aa-0.66□□□□□ -2.52
MIR548U-201ENST00000390728 GCNAQ96QF7 691 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms