RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 IGSF11Q5DX21 431 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 ARL9Q6T311 187 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 LINC00299Q6ZSB3 139 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 ASPGQ86U10 573 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 NRROSQ86YC3 692 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR51L1Q8NGJ5 315 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 PCNPQ8WW12 178 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 TOE1Q96GM8 510 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR2M4Q96R27 311 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 IFT27Q9BW83 186 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 GPR174Q9BXC1 333 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SNX7Q9UNH6 387 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 ABCA7Q8IZY2 2146 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR6C74A6NCV1 312 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 DYRK3O43781 588 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 GMFGO60234 142 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 DNAJB6O75190 326 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 GYPBP06028 91 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 CRYBB2P43320 205 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 EXOSC7Q15024 291 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 NDUFA9Q16795 377 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SLC48A1Q6P1K1 146 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 Q6ZSR6 202 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 KIF18BQ86Y91 864 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SHISA5Q8N114 240 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR52L1Q8NGH7 329 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR8D4Q8NGM9 314 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 NEIL3Q8TAT5 605 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 GNPDA2Q8TDQ7 276 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 RERGQ96A58 199 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SLC41A3Q96GZ6 507 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 RAB11FIP5Q9BXF6 653 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 POLDIP3Q9BY77 421 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 LMAN1LQ9HAT1 526 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 TNFRSF10DQ9UBN6 386 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SCML1Q9UN30 329 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 ZNF670-ZNF695F2Z2N8 137 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 CPNE3O75131 537 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 UBXN7O94888 489 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 IL9P15248 144 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 HNRNPA2B1P22626 353 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 APEX1P27695 318 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 PKLRP30613 574 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SLC3A1Q07837 685 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TDGQ13569 410 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TRMT12Q53H54 448 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 LRRC25Q8N386 305 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR13H1Q8NG92 308 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR7G2Q8NG99 324 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR4K14Q8NGD5 310 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR2L8Q8NGY9 312 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TM9SF4Q92544 642 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 DNAJA3Q96EY1 480 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TIMM29Q9BSF4 260 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SLC38A1Q9H2H9 487 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SLC25A19Q9HC21 320 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 CENPXA8MT69 81 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 OR10H2O60403 315 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 F3P13726 295 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 POU3F3P20264 500 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SNRPD2P62316 118 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 FUT5Q11128 374 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 C1orf61Q13536 156 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 UBXN2BQ14CS0 331 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TBRG1Q3YBR2 411 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 ASB18Q6ZVZ8 466 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TMEM163Q8TC26 289 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SLC35A4Q96G79 324 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 PSD2Q9BQI7 771 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 FOXQ1Q9C009 403 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SYNPO2LQ9H987 977 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 FBRSQ9HAH7 460 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 ATP13A2Q9NQ11 1180 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 MAN2C1Q9NTJ4 1040 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 USP36Q9P275 1121 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 FAM240BA0A1B0GVZ2 78 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 A8MVJ9 347 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 GPR89AB7ZAQ6 455 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 B3GALT2O43825 422 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 GPR89BP0CG08 455 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 PRG2P13727 222 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SDHBP21912 280 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 UQCRC1P31930 480 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SHC2P98077 582 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 CSTF1Q05048 431 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 C12orf73Q69YU5 71 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 PLET1Q6UQ28 207 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 CDK20Q8IZL9 346 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 TOR1AIP2Q8NFQ8 470 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 SPRYD4Q8WW59 207 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 ASB15Q8WXK1 588 aa11.26□□□□□ -0.61
CAPRIN1-202ENST00000389645 RFKQ969G6 155 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms