RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PPM1FP49593 454 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ETV1P50549 477 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 MTTPP55157 894 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 PEX3P56589 373 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 MRPL28Q13084 256 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 RAB31Q13636 194 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ALCAMQ13740 583 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 MORF4L2Q15014 288 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 DUSP7Q16829 419 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 MICAQ29983 383 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 C14orf28Q4W4Y0 310 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 DMRTC1Q5HYR2 192 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 EOGTQ5NDL2 527 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 IBA57Q5T440 356 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 WDR25Q64LD2 544 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM225Q6GV28 225 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 AFTPHQ6ULP2 937 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ABRAXAS1Q6UWZ7 409 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 HRCT1Q6UXD1 115 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMPPEQ6ZT21 453 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 SCXQ7RTU7 201 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ERICH1Q86X53 443 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ARHGAP24Q8N264 748 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ARL6IP6Q8N6S5 226 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ASCC1Q8N9N2 400 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ATG16L2Q8NAA4 619 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 XXYLT1Q8NBI6 393 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ST6GALNAC3Q8NDV1 305 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCDC26Q8TAB7 109 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ACMSDQ8TDX5 336 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 STYXQ8WUJ0 223 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 GOLGA1Q92805 767 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 KIF1BPQ96EK5 621 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 DHTKD1Q96HY7 919 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF625Q96I27 306 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM68Q96MH6 324 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRIB3Q96RU7 358 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 S1PR3Q99500 378 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TEX13AQ9BXU3 409 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ANGPTL4Q9BY76 406 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TBL1XR1Q9BZK7 514 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 CHST6Q9GZX3 395 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 PABPC3Q9H361 631 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZHX3Q9H4I2 956 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 FBXO44Q9H4M3 255 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM185BQ9H7F4 350 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 PTGES2Q9H7Z7 377 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC38A10Q9HBR0 1119 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 AASDHPPTQ9NRN7 309 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 PTTG3PQ9NZH4 202 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 DPM3Q9P2X0 92 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 IL20RAQ9UHF4 553 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 FBXW11Q9UKB1 542 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 NAP1L2Q9ULW6 460 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 HBS1LQ9Y450 684 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRIM17Q9Y577 477 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 LIPGQ9Y5X9 500 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAU2Q9Y6X3 613 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 AFDNP55196 1824 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 ARID2Q68CP9 1835 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 EIF4G1Q04637 1599 aaKnown RBP-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 MGAMO43451 1857 aa-1.43□□□□□ -2.64
RNU6-540P-201ENST00000384622 HEATR5BQ9P2D3 2071 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ASCC3Q8N3C0 2202 aaKnown RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 A0A087WVE0 104 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 A0A087WZ39 114 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 FXYD6-FXYD2A0A087WZ82 144 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGKV3D-7A0A0C4DH55 119 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGKV3OR2-268A0A0C4DH90 116 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ISLRO14498 428 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ALOX15BO15296 676 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 DOK2O60496 412 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 KLHL2O95198 593 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 BAG3O95817 575 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 WDPCPO95876 746 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 NFYAP23511 347 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CMA1P23946 247 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 HOXA9P31269 272 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAGEA3P43357 314 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAGEA6P43360 314 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 TPMTP51580 245 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 AQP5P55064 265 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 NOP14P78316 857 aaKnown RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCNA1P78396 465 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 GSTO1P78417 241 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 MRPS34P82930 218 aaKnown RBP-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 PSG4Q00888 419 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC12A1Q13621 1099 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 WFDC2Q14508 124 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 INSL4Q14641 139 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZCWPW2Q504Y3 356 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 FGD3Q5JSP0 725 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM69AQ5T7M9 428 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ATL3Q6DD88 541 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF470Q6ECI4 717 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 PRR27Q6MZM9 219 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 C2orf91Q6ZV80 131 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 CHST9Q7L1S5 443 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 ABHD13Q7L211 337 aa-1.44□□□□□ -2.64
RNU6-540P-201ENST00000384622 LYG2Q86SG7 212 aa-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms