RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 INSL6Q9Y581 213 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 DAPL1A0PJW8 107 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SPINT1O43278 529 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SEC14L5O43304 696 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 CHST10O43529 356 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 KHDRBS3O75525 346 aaKnown RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 ANKRD34CP0C6C1 535 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 C8orf89P0DMQ9 161 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 IMPA1P29218 277 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 IRS1P35568 1242 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SMIM11AP58511 58 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 BTG1P62324 171 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 METAP1DQ6UB28 335 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 ATRAIDQ6UW56 229 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 Q6ZTK2 550 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 PRICKLE2Q7Z3G6 844 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 LRRC28Q86X40 367 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 RELL2Q8NC24 303 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 OR4D9Q8NGE8 314 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 GLYATL1Q969I3 302 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 TIFAQ96CG3 184 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 F2RL3Q96RI0 385 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 ZNF436Q9C0F3 470 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 NUBP2Q9Y5Y2 271 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 CHD9Q3L8U1 2897 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 OR6C74A6NCV1 312 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 STK25O00506 426 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 FMO6PO60774 539 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 PRKRAO75569 313 aaKnown RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 WNT1P04628 370 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 ACP5P13686 325 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 TRIM23P36406 574 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 C21orf58P58505 322 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 CD276Q5ZPR3 534 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 ELP2Q6IA86 826 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SFXN4Q6P4A7 337 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 LRFN4Q6PJG9 635 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 RTL10Q7L3V2 364 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 GPAT4Q86UL3 456 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 ADGRG3Q86Y34 549 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 OTUB2Q96DC9 234 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SCMH1Q96GD3 660 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 OR2M2Q96R28 347 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 MED18Q9BUE0 208 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 TEX12Q9BXU0 123 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 RSPO3Q9BXY4 272 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 TAAR2Q9P1P5 351 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 SCP2D1Q9UJQ7 156 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 TMEM129A0AVI4 362 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 H0YIV9 168 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 MTRF1O75570 445 aaKnown RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 RLN1P04808 185 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 LPLP06858 475 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 EPCAMP16422 314 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 PRLHRP49683 370 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 METAP1P53582 386 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 PSMA6P60900 246 aaKnown RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 TMEM115Q12893 351 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 FAM198BQ6UWH4 519 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 ZNF416Q9BWM5 594 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 COPZ2Q9P299 210 aa12.94□□□□□ -0.34
SDC1-202ENST00000381150 AK6Q9Y3D8 172 aaKnown RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 SIRT4Q9Y6E7 314 aaPredicted RBP12.94□□□□□ -0.34
SDC1-202ENST00000381150 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 GYPBP06028 91 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 FUT1P19526 365 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 TBXA2RP21731 343 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 UQCRC2P22695 453 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 TMEM201Q5SNT2 666 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 SPRED2Q7Z698 418 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 C12orf40Q86WS4 652 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 OR56A3Q8NH54 315 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 DOK4Q8TEW6 326 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 LRIG1Q96JA1 1093 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 TMEM138Q9NPI0 162 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 DSPPQ9NZW4 1301 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 HLA-DQB1P01920 261 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 PRG2P13727 222 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 CLDN12P56749 244 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 ERVK-25P63136 954 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 DHCR24Q15392 516 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 GSG1Q2KHT4 349 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 HSD17B12Q53GQ0 312 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 C18orf63Q68DL7 685 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 OR5M10Q6IEU7 315 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 TMEM220Q6QAJ8 160 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 PARS2Q7L3T8 475 aaKnown RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 MACROD1Q9BQ69 325 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 CD93Q9NPY3 652 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 A4GNTQ9UNA3 340 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 A0A087WUU8 490 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 FEZF1A0PJY2 475 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms