RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 POU2F3Q9UKI9 436 aa15.31■□□□□ 0.04
HMGN1-203ENST00000380748 SNX24Q9Y343 169 aa15.31■□□□□ 0.04
HMGN1-203ENST00000380748 CCDC189A1A4V9 331 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 IGKV1D-16P01601 117 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 APEHP13798 732 aaKnown RBP15.3■□□□□ 0.04
HMGN1-203ENST00000380748 EDNRAP25101 427 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 FABP6P51161 128 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 EFNA4P52798 201 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 FAM174BQ3ZCQ3 159 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 LETMD1Q6P1Q0 360 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 SLC22A25Q6T423 547 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 TMEM107Q6UX40 140 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 CYS1Q717R9 158 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 LILRA2Q8N149 483 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 MUCL1Q96DR8 90 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 RADILQ96JH8 1075 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 BRF2Q9HAW0 419 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 MCM8Q9UJA3 840 aa15.3■□□□□ 0.04
HMGN1-203ENST00000380748 IGHV4-61A0A0C4DH41 118 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 ESYT3A0FGR9 886 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 GXYLT2A0PJZ3 443 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 PPP6CO00743 305 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 KLHL2O95198 593 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 PSMG1O95456 288 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 TGFAP01135 160 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 YES1P07947 543 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 MPIP34949 423 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 NR4A2P43354 598 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 ZNF41P51814 821 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-203ENST00000380748 RAE1P78406 368 aaKnown RBP15.29■□□□□ 0.04
HMGN1-203ENST00000380748 PRSS53Q2L4Q9 553 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 TECRLQ5HYJ1 363 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 TIMM23BQ5SRD1 257 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 FCRLAQ7L513 359 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 DEPDC4Q8N2C3 294 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 CPNE4Q96A23 557 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-203ENST00000380748 BBS4Q96RK4 519 aa15.29■□□□□ 0.04
HMGN1-203ENST00000380748 DMGDHQ9UI17 866 aaKnown RBP15.29■□□□□ 0.04
HMGN1-203ENST00000380748 MRTO4Q9UKD2 239 aaKnown RBP15.29■□□□□ 0.04
HMGN1-203ENST00000380748 C19orf53Q9UNZ5 99 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-203ENST00000380748 A0A087WV62 115 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 ALG1L2C9J202 215 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 UPK1AO00322 258 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 PCDH7O60245 1069 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 PRKD3O94806 890 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 JUNP05412 331 aaKnown RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 CHN1P15882 459 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 TSPAN8P19075 237 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 IGHV1-2P23083 117 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 OR3A2P47893 321 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 PSMD4P55036 377 aaKnown RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 MANFP55145 182 aaKnown RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 SLC18A2Q05940 514 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 TCHHL1Q5QJ38 904 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 KLC3Q6P597 504 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 TMEM108Q6UXF1 575 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 TRABD2AQ86V40 505 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 CDYL2Q8N8U2 506 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 SH3YL1Q96HL8 342 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 SOX7Q9BT81 388 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 LMF2Q9BU23 707 aaKnown RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 GP6Q9HCN6 339 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 NMRK1Q9NWW6 199 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 VPS29Q9UBQ0 182 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 ING1Q9UK53 422 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-203ENST00000380748 SNX6Q9UNH7 406 aa15.28■□□□□ 0.04
HMGN1-203ENST00000380748 A0A096LPK6 155 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 IGHV3-15A0A0B4J1V0 119 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 GNG14A0A1W2PPG7 69 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 HMX2A2RU54 273 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 OXSR1O95747 527 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-203ENST00000380748 DHRS4L1P0CG22 281 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 GGT1P19440 569 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 COX5AP20674 150 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 GABRA3P34903 492 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 PDLIM4P50479 330 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 ZNF83P51522 516 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 NCBP2P52298 156 aaKnown RBP eCLIP15.27■□□□□ 0.04
HMGN1-203ENST00000380748 FOXF1Q12946 379 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 ZNHIT3Q15649 155 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-203ENST00000380748 MROH9Q5TGP6 573 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 OR2L13Q8N349 312 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 OR4C3Q8NH37 302 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 ACTRT2Q8TDY3 377 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 C16orf78Q8WTQ4 265 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 PIK3R3Q92569 461 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 PIMREGQ9BSJ6 248 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 CXorf36Q9H7Y0 433 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 TIGARQ9NQ88 270 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 DDX18Q9NVP1 670 aaKnown RBP15.27■□□□□ 0.04
HMGN1-203ENST00000380748 MGAT4BQ9UQ53 548 aa15.27■□□□□ 0.04
HMGN1-203ENST00000380748 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 OR5H1A6NKK0 313 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 MYO1GB0I1T2 1018 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 C9JVG2 144 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 STX16-NPEPL1H3BU86 382 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 STX16O14662 325 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 EFNA2O43921 213 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 ENPP1P22413 925 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms