RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 GTF2IRD2Q86UP8 949 aa15.82■□□□□ 0.12
PDLIM4-202ENST00000379018 MMGT1Q8N4V1 131 aa15.82■□□□□ 0.12
PDLIM4-202ENST00000379018 ATP6V1C2Q8NEY4 427 aa15.82■□□□□ 0.12
PDLIM4-202ENST00000379018 KLHL15Q96M94 604 aa15.82■□□□□ 0.12
PDLIM4-202ENST00000379018 AMDHD1Q96NU7 426 aa15.82■□□□□ 0.12
PDLIM4-202ENST00000379018 SNX8Q9Y5X2 465 aa15.82■□□□□ 0.12
PDLIM4-202ENST00000379018 IGHV4-30-2A0A087WSY4 118 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 ADAMDEC1O15204 470 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 RAMP1O60894 148 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 SLITRK5O94991 958 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 NUDT6P53370 316 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 CDH11P55287 796 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 C21orf58P58505 322 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 SFRP5Q5T4F7 317 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 CPTPQ5TA50 214 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 ZAR1Q86SH2 424 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 LILRA2Q8N149 483 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 GABRG1Q8N1C3 465 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 OR4C3Q8NH37 302 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 OR2W6PQ8NHA6 318 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 HSD17B8Q92506 261 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 HTRA1Q92743 480 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 ZBTB8AQ96BR9 441 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 OTUB1Q96FW1 271 aaPredicted RBP15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 RHNO1Q9BSD3 238 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 HDHD5Q9BXW7 423 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 SRXN1Q9BYN0 137 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 CDC42EP4Q9H3Q1 356 aaKnown RBP15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 GRID1Q9ULK0 1009 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 PYCARDQ9ULZ3 195 aa15.81■□□□□ 0.12
PDLIM4-202ENST00000379018 FAM234BA2RU67 622 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 DPRXA6NFQ7 191 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 ALG1L2C9J202 215 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 HAX1O00165 279 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 DLX3O60479 287 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 HPGDP15428 266 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 ADH6P28332 368 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 FOXF1Q12946 379 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 SLC29A2Q14542 456 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 ZNF239Q16600 458 aaKnown RBP15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 GLE1Q53GS7 698 aaKnown RBP15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 C6orf52Q5T4I8 152 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 FAM71E1Q6IPT2 247 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 ANKRD26P1Q6NSI1 321 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 GALNT18Q6P9A2 607 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 BHLHA15Q7RTS1 189 aaPredicted RBP15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 TMEM151AQ8N4L1 468 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 POC1BQ8TC44 478 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 RNF128Q8TEB7 428 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 TRAF4Q9BUZ4 470 aaPredicted RBP15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 POTEKPQ9BYX7 375 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 SHCBP1LQ9BZQ2 653 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 TRIM2Q9C040 744 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 BARX1Q9HBU1 254 aaPredicted RBP15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 ZDHHC18Q9NUE0 388 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 CISD1Q9NZ45 108 aaKnown RBP15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 TMEM216Q9P0N5 145 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 KLHL13Q9P2N7 655 aa15.8■□□□□ 0.12
PDLIM4-202ENST00000379018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.79■□□□□ 0.121e-5■■■■□ 21.5
PDLIM4-202ENST00000379018 IGHV3-15A0A0B4J1V0 119 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 CCDC151A5D8V7 595 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 LYZL6O75951 148 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 NUDT14O95848 222 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 CD8AP01732 235 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 ENO1P06733 434 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 FESP07332 822 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 PABPC4LP0CB38 370 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 FAM157CP0CG43 387 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 PRPS2P11908 318 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 PSMA4P25789 261 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 GSTM5P46439 218 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 PRIM2P49643 509 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 FOXA1P55317 472 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 SRSF2Q01130 221 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 LCP2Q13094 533 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 C8orf74Q6P047 294 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 FCRLAQ7L513 359 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 PIWIL2Q8TC59 973 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 DCAKDQ8WVC6 231 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 CIDECQ96AQ7 238 aaPredicted RBP15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 CHMP6Q96FZ7 201 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 KCNK17Q96T54 332 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 BEX2Q9BXY8 128 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 MID1IP1Q9NPA3 183 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 MYNNQ9NPC7 610 aa15.79■□□□□ 0.12
PDLIM4-202ENST00000379018 C9JVG2 144 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 PDPK1O15530 556 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 ACP2P11117 423 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CASQ1P31415 396 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 RNPS1Q15287 305 aaKnown RBP15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CD226Q15762 336 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 KRTAP24-1Q3LI83 254 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 VPS26BQ4G0F5 336 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CCNJQ5T5M9 372 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CCNYL1Q8N7R7 359 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 B4GALNT2Q8NHY0 566 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 JADE3Q92613 823 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CPNE4Q96A23 557 aaPredicted RBP15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 ZNF775Q96BV0 537 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms