RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DEPDC4Q8N2C3 294 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 FLRT3Q9NZU0 649 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 IGHV3-20A0A0C4DH32 117 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 FRG2CA6NGY1 282 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 IDSB3KWA1 339 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 H3BN98 237 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 H3BSA7 217 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 HBQ1P09105 142 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 PSMD4P55036 377 aaKnown RBP16■□□□□ 0.15
THUMPD2-201ENST00000378727 EBPQ15125 230 aaKnown RBP16■□□□□ 0.15
THUMPD2-201ENST00000378727 NEDD8Q15843 81 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 SLX4IPQ5VYV7 408 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 BPHLQ86WA6 291 aaPredicted RBP16■□□□□ 0.15
THUMPD2-201ENST00000378727 KIF18BQ86Y91 864 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 AGBL5Q8NDL9 886 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 TOR1AIP2Q8NFQ8 470 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 OR1N1Q8NGS0 311 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 DGCR14Q96DF8 476 aaKnown RBP16■□□□□ 0.15
THUMPD2-201ENST00000378727 FAM46AQ96IP4 442 aaKnown RBP16■□□□□ 0.15
THUMPD2-201ENST00000378727 LCORQ96JN0 433 aaPredicted RBP16■□□□□ 0.15
THUMPD2-201ENST00000378727 ART5Q96L15 291 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 C11orf16Q9NQ32 467 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 C14orf105Q9NVL8 296 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 CNIH4Q9P003 139 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 CEPT1Q9Y6K0 416 aa16■□□□□ 0.15
THUMPD2-201ENST00000378727 VSTM2BA6NLU5 285 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 FLRT2O43155 660 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 PIP5K1CO60331 668 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 CCL4P13236 92 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 GPR143P51810 404 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 CDC42P60953 191 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 CNPY1Q3B7I2 92 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 MBOAT2Q6ZWT7 520 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 NRMQ8IXM6 262 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 GNPDA2Q8TDQ7 276 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 GAL3ST4Q96RP7 486 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 NODALQ96S42 347 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 PHOX2BQ99453 314 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 NRSN2Q9GZP1 204 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 EVA1AQ9H8M9 152 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 AKIRIN1Q9H9L7 192 aaPredicted RBP15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 IMPAD1Q9NX62 359 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 ERVK-18Q9QC07 812 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 TPRKBQ9Y3C4 175 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 KIF26BQ2KJY2 2108 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 C2orf92A0A1B0GVN3 265 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 FAM86C2PA6NEL3 165 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 FAM20BO75063 409 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 IL33O95760 270 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 ZNF28P17035 718 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 PTNP21246 168 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 GSTM3P21266 225 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 IFNGR2P38484 337 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 TSPAN31Q12999 210 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 NDUFAF6Q330K2 333 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 KLHL26Q53HC5 615 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 C12orf73Q69YU5 71 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 RRM2BQ7LG56 351 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 ANKRD37Q7Z713 158 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 PIGXQ8TBF5 258 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 ZNF559Q9BR84 538 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 RXFP3Q9NSD7 469 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 SCN3BQ9NY72 215 aa15.99■□□□□ 0.15
THUMPD2-201ENST00000378727 SERINC4A6NH21 518 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 MEN1O00255 615 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 CDX4O14627 284 aaPredicted RBP15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 KLF4O43474 513 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 HEXBP07686 556 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 JUNBP17275 347 aaPredicted RBP15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 RAB39AQ14964 217 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 ZBED5Q49AG3 693 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 P3H2Q8IVL5 708 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 CMIPQ8IY22 773 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 POGLUT1Q8NBL1 392 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 ZNF540Q8NDQ6 660 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 PMEPA1Q969W9 287 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 PLA2G12AQ9BZM1 189 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 YIPF3Q9GZM5 350 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 WWTR1Q9GZV5 400 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 DSN1Q9H410 356 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 COPS7AQ9UBW8 275 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 HEATR5AQ86XA9 2040 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 CDC14CA4D256 554 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 ALOX12BO75342 701 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 TEKQ02763 1124 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 ZNF613Q6PF04 617 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 GPR141Q7Z602 305 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 PRR22Q8IZ63 422 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 IQCF1Q8N6M8 205 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 SPSB2Q99619 263 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 EGLN3Q9H6Z9 239 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 PLCXD1Q9NUJ7 323 aa15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 ZNF223Q9UK11 482 aaPredicted RBP15.98■□□□□ 0.15
THUMPD2-201ENST00000378727 A0A0B4J2E0 115 aa15.97■□□□□ 0.15
THUMPD2-201ENST00000378727 A0A1B0GX12 115 aa15.97■□□□□ 0.15
THUMPD2-201ENST00000378727 SYNDIG1LA6NDD5 238 aa15.97■□□□□ 0.15
THUMPD2-201ENST00000378727 GALR2O43603 387 aaPredicted RBP15.97■□□□□ 0.15
THUMPD2-201ENST00000378727 CPNE3O75131 537 aaKnown RBP15.97■□□□□ 0.15
THUMPD2-201ENST00000378727 CSTAP01040 98 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms