RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PLAG1Q6DJT9 500 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ZC3H14Q6PJT7 736 aaKnown RBP14.13□□□□□ -0.15
NPHP4-201ENST00000378156 DLEU7Q6UYE1 221 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 RAB11FIP2Q7L804 512 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ALDH16A1Q8IZ83 802 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 OR13F1Q8NGS4 319 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 OR8K3Q8NH51 312 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 SYT4Q9H2B2 425 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ZNF576Q9H609 170 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 PCDH10Q9P2E7 1040 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 THAP10Q9P2Z0 257 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ERVK-19Q9WJR5 959 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 H0YIV9 168 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 C1QAP02745 245 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 GTF2F2P13984 249 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 CCNOP22674 350 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ACVR1BP36896 505 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 ZNF283Q8N7M2 679 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 MFSD8Q8NHS3 518 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 MRPL38Q96DV4 380 aaKnown RBP14.13□□□□□ -0.15
NPHP4-201ENST00000378156 GPN2Q9H9Y4 310 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-201ENST00000378156 MYO10Q9HD67 2058 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 CDK1P06493 297 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 HOXD12P35452 270 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 APOFQ13790 326 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 FAM198BQ6UWH4 519 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 CEACAM19Q7Z692 300 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 FANCFQ9NPI8 374 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 STARD5Q9NSY2 213 aa14.13□□□□□ -0.15
NPHP4-201ENST00000378156 A0A1B0GTL3 188 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 ADH6P28332 368 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 AHRP35869 848 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 LPAL2Q16609 132 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 GGTA1PQ4G0N0 100 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 MS4A15Q8N5U1 240 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 LINC01599Q8WXQ3 324 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 P2RY12Q9H244 342 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 TAS2R8Q9NYW2 309 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 NUFIP1Q9UHK0 495 aaKnown RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 B3GNT3Q9Y2A9 372 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 ASB4Q9Y574 426 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 SHANK3Q9BYB0 1731 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 SYNGR4O95473 234 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 ZDHHC11BP0C7U3 371 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 MAOBP27338 520 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 NR0B1P51843 470 aaKnown RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 FXYD6P3P58550 94 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 POU4F2Q12837 409 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 FRMPD2BQ6IN97 320 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 OR52E2Q8NGJ4 325 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 OR4C15Q8NGM1 316 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 TBC1D15Q8TC07 691 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 MUL1Q969V5 352 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 BMFQ96LC9 184 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 OBP2AQ9NY56 170 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 NAALAD2Q9Y3Q0 740 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 FOXE1O00358 373 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 UPK1BO75841 260 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 H2BFMP0C1H6 154 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 S100PP25815 95 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 XCR1P46094 333 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 SGCAQ16586 387 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 AADACL4Q5VUY2 407 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 RAET1LQ5VY80 246 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 LILRA3Q8N6C8 439 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 UBTD2Q8WUN7 234 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 NECAB3Q96P71 396 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 POT1Q9NUX5 634 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 TAAR2Q9P1P5 351 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 B4GALT7Q9UBV7 327 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 NOX1Q9Y5S8 564 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 C17orf105B2RV13 164 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 CASC3O15234 703 aaKnown RBP14.12□□□□□ -0.15
NPHP4-201ENST00000378156 LDB3O75112 727 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 LYSMD4Q5XG99 296 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 ANKRD54Q6NXT1 300 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 ZNF584Q8IVC4 421 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 L3MBTL4Q8NA19 623 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 OR4K13Q8NH42 304 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 WBP2Q969T9 261 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 CHFRQ96EP1 664 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 CRB3Q9BUF7 120 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 HDAC8Q9BY41 377 aa14.12□□□□□ -0.15
NPHP4-201ENST00000378156 FMO6PO60774 539 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 TOXO94900 526 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 CRYZL1O95825 349 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 CXCL10P02778 98 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 ARSKQ6UWY0 536 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 MAMDC2Q7Z304 686 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-201ENST00000378156 BEST3Q8N1M1 668 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 METTL4Q8N3J2 472 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 ASB15Q8WXK1 588 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 GGHQ92820 318 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 TMEM41AQ96HV5 264 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 PINK1Q9BXM7 581 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 UNKLQ9H9P5 680 aaKnown RBP14.11□□□□□ -0.15
NPHP4-201ENST00000378156 PDFQ9HBH1 243 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 NDUFAF4Q9P032 175 aa14.11□□□□□ -0.15
NPHP4-201ENST00000378156 A0A1W2PQL4 384 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms