RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 PRDM7Q9NQW5 492 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CUTCQ9NTM9 273 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 POFUT2Q9Y2G5 429 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MED31Q9Y3C7 131 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GRIP1Q9Y3R0 1128 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CSPG4Q6UVK1 2322 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 PHF3Q92576 2039 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 IGHV1OR15-9A0A0B4J2B8 117 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 IGHV3-64DA0A0J9YX35 117 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 POLR1CO15160 346 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF217O75362 1048 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 BCAS1O75363 584 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MFN2O95140 757 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GPR75O95800 540 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 IGHV3-9P01782 118 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MYF6P23409 242 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CXCR1P25024 350 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SERPINB1P30740 379 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 PCGF2P35227 344 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CSRP3P50461 194 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 NKX2-5P52952 324 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 RPS18P62269 152 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ABATP80404 500 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MRPS15P82914 257 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 TP53I3Q53FA7 332 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 C10orf62Q5T681 223 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SLC27A4Q6P1M0 643 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FAM131AQ6UXB0 335 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 TMEM184AQ6ZMB5 413 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 BATF2Q8N1L9 274 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 IL22RA1Q8N6P7 574 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF347Q96SE7 839 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 S1PR5Q9H228 398 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 DDX31Q9H8H2 851 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FBRSQ9HAH7 460 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 LUZP4Q9P127 313 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GPN3Q9UHW5 284 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ANAPC1Q9H1A4 1944 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 A0A087WUU8 490 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 RIIAD1A6NNX1 92 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FOXE1O00358 373 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 HRO43593 1189 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GPANK1O95872 356 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 NPPAP01160 153 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 RHCEP18577 417 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CD1CP29017 333 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 TRHRP34981 398 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SOX6P35712 828 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ATP12AP54707 1039 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GALK2Q01415 458 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MAD2L1BPQ15013 274 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MED25Q71SY5 747 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MARCH3Q86UD3 253 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 VASH2Q86V25 355 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ERI1Q8IV48 349 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SIRT6Q8N6T7 355 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GPR32P1Q8NGA4 272 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 OR6N2Q8NGY6 317 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SUN3Q8TAQ9 357 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 LGALS12Q96DT0 336 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 TNFRSF13CQ96RJ3 184 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CENPOQ9BU64 300 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 OR51B6Q9H340 312 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 PELI2Q9HAT8 420 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GALNT9Q9HCQ5 603 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 IER3IP1Q9Y5U9 82 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CTDSP2O14595 271 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TPD52L2O43399 206 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PRKYO43930 277 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CHRNB1P11230 501 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CCKBRP32239 447 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 GRK6P43250 576 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 OR12D2P58182 307 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CHAF1BQ13112 559 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CCINQ13939 588 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 DECR1Q16698 335 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 COQ5Q5HYK3 327 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ZER1Q7Z7L7 766 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SERPINA12Q8IW75 414 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SLC15A4Q8N697 577 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CCDC168Q8NDH2 2452 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 COL12A1Q99715 3063 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 EMC6Q9BV81 110 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SERHL2Q9H4I8 314 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CD320Q9NPF0 282 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 RPRD1BQ9NQG5 326 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ACER3Q9NUN7 267 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 MCUBQ9NWR8 336 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 NDUFA13Q9P0J0 144 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PRODH2Q9UF12 536 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 MAPRE3Q9UPY8 281 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PTRH2Q9Y3E5 179 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TLN2Q9Y4G6 2542 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms