RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 NAV3Q8IVL0 2385 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 A0A1W2PPR1 153 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 A0A1W2PRB8 838 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 H0YC42 278 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 LYPLA1O75608 230 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 KCNK2O95069 426 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 FAM153BP0C7A2 387 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 ADH6P28332 368 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 CCKARP32238 428 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 SERPINB5P36952 375 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 TPD52P55327 224 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 POU6F2P78424 691 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 SLC18A2Q05940 514 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 PRSS53Q2L4Q9 553 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 PLPPR5Q32ZL2 321 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 FAM153CQ494X1 144 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 FAM219BQ5XKK7 198 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 KANK2Q63ZY3 851 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 PLEKHM3Q6ZWE6 761 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 SSX8Q7RTT4 187 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 DDIASQ8IXT1 998 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 STEAP2Q8NFT2 490 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 OR56A1Q8NGH5 318 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 FAM110BQ8TC76 370 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 CPNE4Q96A23 557 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 CIDECQ96AQ7 238 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 MOAP1Q96BY2 351 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 CHMP6Q96FZ7 201 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 ZC3HAV1LQ96H79 300 aaKnown RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 COX4I2Q96KJ9 171 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 GSX2Q9BZM3 304 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 RTN4RQ9BZR6 473 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 ZCCHC3Q9NUD5 404 aaKnown RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 MED17Q9NVC6 651 aa13.23□□□□□ -0.29
HDAC6-204ENST00000376643 FAF1Q9UNN5 650 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-204ENST00000376643 HRNRQ86YZ3 2850 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-204ENST00000376643 C17orf51A8MQB3 221 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
HDAC6-204ENST00000376643 AKAP10O43572 662 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 GMFGO60234 142 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 NPHS1O60500 1241 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 AQP8O94778 261 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 FGF4P08620 206 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 PSMB1P20618 241 aaKnown RBP13.22□□□□□ -0.29
HDAC6-204ENST00000376643 TP53BP2Q13625 1128 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 LSM12Q3MHD2 195 aaKnown RBP13.22□□□□□ -0.29
HDAC6-204ENST00000376643 TMEM201Q5SNT2 666 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 FIGNL1Q6PIW4 674 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 APOOLQ6UXV4 268 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 Q6ZSR9 355 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 ZNF550Q7Z398 422 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 YTHDF3Q7Z739 585 aaKnown RBP13.22□□□□□ -0.29
HDAC6-204ENST00000376643 C10orf107Q8IVU9 208 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 SLC16A11Q8NCK7 471 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 OR4C3Q8NH37 302 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 TMEM171Q8WVE6 324 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 KLHL15Q96M94 604 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 RNF145Q96MT1 663 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 PIGUQ9H490 435 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 FIS1Q9Y3D6 152 aa13.22□□□□□ -0.29
HDAC6-204ENST00000376643 GPC6Q9Y625 555 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-204ENST00000376643 MAP1AP78559 2803 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-204ENST00000376643 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 SMIM23A6NLE4 172 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 CXCL13O43927 109 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 IGKV1D-16P01601 117 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 LINC00032P0C843 101 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ACP2P11117 423 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 CARD18P57730 90 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 DUSP5Q16690 384 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 SPDYE7PQ495Y7 208 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 GALNTL6Q49A17 601 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 RFTN2Q52LD8 501 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ANKRD26P1Q6NSI1 321 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 CDC73Q6P1J9 531 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 KRTAP1-3Q8IUG1 177 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 SLC43A2Q8N370 569 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ADAMTS15Q8TE58 950 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 TWIST2Q8WVJ9 160 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 APOPT1Q96IL0 206 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ADGRG7Q96K78 797 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 MARK4Q96L34 752 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 GATA5Q9BWX5 397 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-204ENST00000376643 L2HGDHQ9H9P8 463 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ATP6V1HQ9UI12 483 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 DNAJC15Q9Y5T4 150 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 ACTL7BQ9Y614 415 aa13.21□□□□□ -0.29
HDAC6-204ENST00000376643 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 TNFSF11O14788 317 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 SCAMP2O15127 329 aaKnown RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 SIAH2O43255 324 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 NUDT14O95848 222 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 AK1P00568 194 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 HMGN2P05204 90 aaKnown RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 FESP07332 822 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 BCKDHAP12694 445 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms