RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TSACCQ96A04 125 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 A0A0U1RQF3 1178 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 GABRR1P24046 479 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 EPHA4P54764 986 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 INCA1Q0VD86 236 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CCNJQ5T5M9 372 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 PRSS48Q7RTY5 328 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SIX2Q9NPC8 291 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 NPC1O15118 1278 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 FGFBP1Q14512 234 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 IGFN1Q86VF2 1251 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 OR6C4Q8NGE1 309 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 OR52N2Q8NGI0 321 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CD1DP15813 335 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SNRPD2P62316 118 aaKnown RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 PNCKQ6P2M8 343 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 OR5W2Q8NH69 310 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 HTR1EP28566 365 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CRABP1P29762 137 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 MSMO1Q15800 293 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SENP5Q96HI0 755 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 HCAR1Q9BXC0 346 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 TJP1Q07157 1748 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 H3BML4 177 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 TK1P04183 234 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 FAM163BP0C2L3 166 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 MAGEB1P43366 347 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 PAN3Q58A45 887 aaKnown RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CNIH2Q6PI25 160 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CREB3L2Q70SY1 520 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 OR5D14Q8NGL3 314 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SLC38A1Q9H2H9 487 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CUTCQ9NTM9 273 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 NKX2-5P52952 324 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 TAS2R46P59540 309 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CNN3Q15417 329 aaKnown RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 C3orf38Q5JPI3 329 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 NDUFAF5Q5TEU4 345 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF852Q6ZMS4 543 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 GPR155Q7Z3F1 870 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 IL1F10Q8WWZ1 152 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 XPNPEP1Q9NQW7 623 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 ASB4Q9Y574 426 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 ATAD5Q96QE3 1844 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 NAP1L6A6NFF2 107 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 A8MVM7 634 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 STSP08842 583 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SLC6A8P48029 635 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 TCTE1Q5JU00 501 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 CMIPQ8IY22 773 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SLC25A31Q9H0C2 315 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 NUBP2Q9Y5Y2 271 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 A0A1W2PS29 197 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 PRPH2P23942 346 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 NR4A2P43354 598 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 CTXN1P60606 82 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 TSSK4Q6SA08 328 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 RSPRY1Q96DX4 576 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF436Q9C0F3 470 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 PPP1R3DO95685 299 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF317Q96PQ6 595 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 UBFD1O14562 309 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 RETP07949 1114 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 SOX3P41225 446 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 SCAPQ12770 1279 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 Q9Y3F1 56 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 TXNL1O43396 289 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF888P0CJ79 500 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 RAB6AP20340 208 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 HHEXQ03014 270 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 TAP2Q03519 686 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 DPY19L2P1Q6NXN4 242 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 COG8Q96MW5 612 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 TOR1AO14656 332 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 AGPAT2O15120 278 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 IL13RA1P78552 427 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 SLC43A2Q8N370 569 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 OR13J1Q8NGT2 312 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 SPHK2Q9NRA0 654 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 CD300AQ9UGN4 299 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 DIO3P55073 304 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 TSPYL5Q86VY4 417 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 IMP4Q96G21 291 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 PRMT8Q9NR22 394 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 CNOT11Q9UKZ1 510 aaKnown RBP11.79□□□□□ -0.52
VPS13A-204ENST00000376634 COQ4Q9Y3A0 265 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 CPT2P23786 658 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 IL32P24001 234 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 LMAN2Q12907 356 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 SERTAD2Q14140 314 aa11.79□□□□□ -0.52
VPS13A-204ENST00000376634 FAM122CQ6P4D5 195 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms