RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 GALNT10Q86SR1 603 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 TRABD2AQ86V40 505 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 MTERF3Q96E29 417 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 REXO5Q96IC2 774 aaKnown RBP20.75■□□□□ 0.91
C9orf47-202ENST00000375850 FCRL1Q96LA6 429 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 RNF145Q96MT1 663 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 USB1Q9BQ65 265 aaKnown RBP20.75■□□□□ 0.91
C9orf47-202ENST00000375850 GP6Q9HCN6 339 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 CLEC4AQ9UMR7 237 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 TMED5Q9Y3A6 229 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 SOX30O94993 753 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 KCNK2O95069 426 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 ALOX5P09917 674 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 PRKAG1P54619 331 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 RNPS1Q15287 305 aaKnown RBP20.74■□□□□ 0.91
C9orf47-202ENST00000375850 ETFDHQ16134 617 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 HBMQ6B0K9 141 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 ADAM5Q6NVV9 412 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 GIMAP5Q96F15 307 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 PLPPR2Q96GM1 343 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 KLHL15Q96M94 604 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 TACO1Q9BSH4 297 aaKnown RBP20.74■□□□□ 0.91
C9orf47-202ENST00000375850 TRMOQ9BU70 441 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 PPCSQ9HAB8 311 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 NGBQ9NPG2 151 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 OXSMQ9NWU1 459 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 TBK1Q9UHD2 729 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 MID2Q9UJV3 735 aa20.74■□□□□ 0.91
C9orf47-202ENST00000375850 RAI1Q7Z5J4 1906 aaPredicted RBP20.74■□□□□ 0.91
C9orf47-202ENST00000375850 JMJD1CQ15652 2540 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 GJE1A6NN92 205 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 TNFSF11O14788 317 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 CHEK2O96017 543 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 ADH6P28332 368 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 AGTR1P30556 359 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 ASMTP46597 345 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 PRIM2P49643 509 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 ATP5J2P56134 94 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 PDE7AQ13946 482 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 MFSD12Q6NUT3 480 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 SZRD1Q7Z422 152 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 R3HCC1LQ7Z5L2 792 aaKnown RBP20.73■□□□□ 0.91
C9orf47-202ENST00000375850 MTERF4Q7Z6M4 381 aaKnown RBP20.73■□□□□ 0.91
C9orf47-202ENST00000375850 PRIMA1Q86XR5 153 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 WFDC8Q8IUA0 241 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 COX18Q8N8Q8 333 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 SLC16A11Q8NCK7 471 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 B4GALNT2Q8NHY0 566 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 CPNE4Q96A23 557 aaPredicted RBP20.73■□□□□ 0.91
C9orf47-202ENST00000375850 CIDECQ96AQ7 238 aaPredicted RBP20.73■□□□□ 0.91
C9orf47-202ENST00000375850 GIN1Q9NXP7 522 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 SH3BP4Q9P0V3 963 aa20.73■□□□□ 0.91
C9orf47-202ENST00000375850 DSCAMO60469 2012 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 A0A0J9YW62 118 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 PLIN3O60664 434 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 ACP2P11117 423 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 CPA3P15088 417 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 CRHR1P34998 444 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 CARD18P57730 90 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 MLC1Q15049 377 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 TMEM201Q5SNT2 666 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 OSTF1Q92882 214 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 STACQ99469 402 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 BTBD2Q9BX70 525 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 HOXD1Q9GZZ0 328 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 DUSP22Q9NRW4 184 aa20.72■□□□□ 0.91
C9orf47-202ENST00000375850 KIF2AO00139 706 aaPredicted RBP20.71■□□□□ 0.91
C9orf47-202ENST00000375850 AZIN1O14977 448 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 SDC1P18827 310 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 RPL3P39023 403 aaKnown RBP20.71■□□□□ 0.91
C9orf47-202ENST00000375850 SUMO3P55854 103 aaPredicted RBP20.71■□□□□ 0.91
C9orf47-202ENST00000375850 RPS4XP62701 263 aaKnown RBP20.71■□□□□ 0.91
C9orf47-202ENST00000375850 POU6F2P78424 691 aaPredicted RBP20.71■□□□□ 0.91
C9orf47-202ENST00000375850 DUSP5Q16690 384 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 EXOSC6Q5RKV6 272 aaKnown RBP20.71■□□□□ 0.91
C9orf47-202ENST00000375850 LIPMQ5VYY2 423 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 FIGNL1Q6PIW4 674 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 LRIG3Q6UXM1 1119 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 LILRA2Q8N149 483 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 CEP112Q8N8E3 955 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 CCDC63Q8NA47 563 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 GATSQ8NAP1 163 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 ZNF527Q8NB42 609 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 RNF128Q8TEB7 428 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 TXLNGYQ9BZA5 131 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 DNHD1Q96M86 4753 aa20.71■□□□□ 0.91
C9orf47-202ENST00000375850 A0A1W2PPM1 405 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 INAFM1C9JVW0 142 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 H3BNH8 94 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 LINGO3P0C6S8 592 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 ZNF239Q16600 458 aaKnown RBP20.7■□□□□ 0.9
C9orf47-202ENST00000375850 ZNF385BQ569K4 471 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 CLEC6AQ6EIG7 209 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 ANKRD26P1Q6NSI1 321 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 Q6ZSR9 355 aa20.7■□□□□ 0.9
C9orf47-202ENST00000375850 AKAP1Q92667 903 aaKnown RBP eCLIP20.7■□□□□ 0.9
C9orf47-202ENST00000375850 TRMT61AQ96FX7 289 aaKnown RBP20.7■□□□□ 0.9
C9orf47-202ENST00000375850 SH3YL1Q96HL8 342 aaPredicted RBP20.7■□□□□ 0.9
C9orf47-202ENST00000375850 TSSK3Q96PN8 268 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms