RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 DNAH14Q0VDD8 3507 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A1W2PR48 441 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 SHOXO15266 292 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 REM1O75628 298 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ZIC2O95409 532 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 DHFRP00374 187 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 GAAP10253 952 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 FCARP24071 287 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 STOMP27105 288 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 NTSP30990 170 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 MTNR1BP49286 362 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CLDN2P57739 230 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CSNK1G2P78368 415 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 TGM3Q08188 693 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC25A35Q3KQZ1 300 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 C9orf64Q5T6V5 341 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 C18orf63Q68DL7 685 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CXXC5Q7LFL8 322 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 OAFQ86UD1 273 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 AMZ2Q86W34 360 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 OMA1Q96E52 524 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 SCMH1Q96GD3 660 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ARHGDIGQ99819 225 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 HEXA-AS1Q9H8Q6 139 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 BEX1Q9HBH7 125 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 EVA1BQ9NVM1 165 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CLDND1Q9NY35 253 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 MRPS7Q9Y2R9 242 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 KIAA1549LQ6ZVL6 1849 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 LRIT2A6NDA9 550 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 J3QRE1 110 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 FPR3P25089 353 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 GIFP27352 417 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 LTBRP36941 435 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 STAT5AP42229 794 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 CCR6P51684 374 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 SRP54P61011 504 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 E2F1Q01094 437 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC3A1Q07837 685 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC36A2Q495M3 483 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 C6orf132Q5T0Z8 1188 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 LYPD4Q6UWN0 246 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 TMEM184AQ6ZMB5 413 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF620Q6ZNG0 422 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 KXD1Q9BQD3 176 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 DPCDQ9BVM2 203 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ZDHHC4Q9NPG8 344 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 EIF3KQ9UBQ5 218 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 PHF11Q9UIL8 331 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 DOCK8Q8NF50 2099 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A0B4J203 849 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 IGKV1-8A0A0C4DH67 115 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 TEX13CA0A0J9YWL9 993 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 PDGFAP04085 211 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 DRD2P14416 443 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 MC3RP41968 323 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 GCGRP47871 477 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 RFX3P48380 749 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ANGPT1Q15389 498 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 SFXN4Q6P4A7 337 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 KIAA0907Q7Z7F0 614 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ACBD7Q8N6N7 88 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 OR5K2Q8NHB8 316 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 KAT2AQ92830 837 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF514Q96K75 400 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 MCHR1Q99705 422 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 MENTQ9BUN1 341 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 S1PR5Q9H228 398 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 OR51J1Q9H342 316 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 UBQLN3Q9H347 655 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 DZANK1Q9NVP4 752 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 GPR34Q9UPC5 381 aa13.15□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A1W2PPK0 400 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 C7orf66A4D0T2 115 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC9B1P1A6NJY1 282 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SOX30O94993 753 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 RAF1P04049 648 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 TCRBP04435 133 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ZGLP1P0C6A0 271 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ADH5P11766 374 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ACSL1P33121 698 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 KLHL12Q53G59 568 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 VITQ6UXI7 678 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 RPTNQ6XPR3 784 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 CEACAM19Q7Z692 300 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SYT9Q86SS6 491 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 LRRTM4Q86VH4 590 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms