RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 AICDAQ9GZX7 198 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 UBQLN3Q9H347 655 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 NLGN3Q9NZ94 848 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 SCP2D1Q9UJQ7 156 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 HEATR5BQ9P2D3 2071 aa19.71■□□□□ 0.75
UPF3A-202ENST00000375299 CDC42EP2O14613 210 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 SLC9A3R1O14745 358 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-202ENST00000375299 CCR6P51684 374 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 TGM3Q08188 693 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 GALEQ14376 348 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 PXDC1Q5TGL8 231 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-202ENST00000375299 OR5K2Q8NHB8 316 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 CEP76Q8TAP6 659 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 DEFB118Q96PH6 123 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 MED20Q9H944 212 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 COQ3Q9NZJ6 369 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 ZNF224Q9NZL3 707 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 A0A1W2PPV9 198 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 PLPP2O43688 288 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 UBL3O95164 117 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 PRKAR1BP31321 381 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 HSD17B2P37059 387 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 SOX9P48436 509 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 MMP15P51511 669 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 DGCR2P98153 550 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 ZNF267Q14586 743 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-202ENST00000375299 BTN2A1Q7KYR7 527 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 ABHD4Q8TB40 342 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 DACT3Q96B18 629 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-202ENST00000375299 CNRIP1Q96F85 164 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-202ENST00000375299 RADILQ96JH8 1075 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 RBP7Q96R05 134 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 KLHL1Q9NR64 748 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 CALML5Q9NZT1 146 aa19.7■□□□□ 0.74
UPF3A-202ENST00000375299 E9PI62 339 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 VEGFDO43915 354 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 CLEC3AO75596 197 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 OR5F1O95221 314 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 C8AP07357 584 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 RRASP10301 218 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 C6P13671 934 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 UGT2B7P16662 529 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 CCR2P41597 374 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 CSNK1G2P78368 415 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 PRR5P85299 388 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 SLC3A1Q07837 685 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 ZNF687Q8N1G0 1237 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 C7orf50Q9BRJ6 194 aaKnown RBP19.69■□□□□ 0.74
UPF3A-202ENST00000375299 MENTQ9BUN1 341 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 FN3KQ9H479 309 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 EQTNQ9NQ60 294 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 PCDH10Q9P2E7 1040 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 PGRMC2O15173 223 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 MT-ND5P03915 603 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 PTGS2P35354 604 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 ARFIP1P53367 373 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 STXBP1P61764 594 aaKnown RBP19.69■□□□□ 0.74
UPF3A-202ENST00000375299 PITPNAQ00169 270 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 PUDPQ08623 228 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 SLC9A5Q14940 896 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 BEST4Q8NFU0 473 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 OR10H4Q8NGA5 316 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 GANCQ8TET4 914 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 NDC1Q9BTX1 674 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 TMEM168Q9H0V1 697 aa19.69■□□□□ 0.74
UPF3A-202ENST00000375299 LRIT2A6NDA9 550 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 ZNF593O00488 134 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-202ENST00000375299 EMC8O43402 210 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 SSNA1O43805 119 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 RPN2P04844 631 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 ZGLP1P0C6A0 271 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 C8orf89P0DMQ9 161 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 PTNP21246 168 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 EPHA5P54756 1037 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 RAB14P61106 215 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 E2F1Q01094 437 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 C9orf64Q5T6V5 341 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 GET4Q7L5D6 327 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-202ENST00000375299 PXKQ7Z7A4 578 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 GALNT11Q8NCW6 608 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 NUP43Q8NFH3 380 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 OR52D1Q9H346 318 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 INPP5EQ9NRR6 644 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 CLEC4AQ9UMR7 237 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 IRAK3Q9Y616 596 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 NPTNQ9Y639 398 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 MYO10Q9HD67 2058 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 SC5DO75845 299 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 NAT1P18440 290 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 LILRA6Q6PI73 481 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 SLC39A5Q6ZMH5 540 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 C16orf62Q7Z3J2 963 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 CDH24Q86UP0 819 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 AMZ2Q86W34 360 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 CMIPQ8IY22 773 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 RPLP0P6Q8NHW5 317 aa19.68■□□□□ 0.74
UPF3A-202ENST00000375299 BRIX1Q8TDN6 353 aaKnown RBP19.68■□□□□ 0.74
UPF3A-202ENST00000375299 KISS1RQ969F8 398 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-202ENST00000375299 C12orf66Q96MD2 445 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms