RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 FHL5Q5TD97 284 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 MBOAT2Q6ZWT7 520 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 GALNT12Q8IXK2 581 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 SHISA5Q8N114 240 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 CA13Q8N1Q1 262 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 OR8D4Q8NGM9 314 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 RNFT2Q96EX2 444 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 MROQ9BYG7 248 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF350Q9GZX5 532 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 NUAK2Q9H093 628 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 PCED1AQ9H1Q7 454 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 SEMA6CQ9H3T2 930 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 TESQ9UGI8 421 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 PEX16Q9Y5Y5 336 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 CEP250Q9BV73 2442 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 TAF4O00268 1085 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 RDH16O75452 317 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 CH25HO95992 272 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 HBQ1P09105 142 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 CD38P28907 300 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 GABRA3P34903 492 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 SOX18P35713 384 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 MTNR1AP48039 350 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 RACK1P63244 317 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 EEF1A1P68104 462 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 RAB40BQ12829 278 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 DOC2BQ14184 412 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 OXA1LQ15070 435 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 PRICKLE4Q2TBC4 344 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 DEFB110Q30KQ9 67 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 SLC30A6Q6NXT4 461 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 ZCCHC12Q6PEW1 402 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 FIGNL1Q6PIW4 674 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 PAQR6Q6TCH4 344 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 PARGQ86W56 976 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 RBM12BQ8IXT5 1001 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 STACQ99469 402 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 NXF2Q9GZY0 626 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 GAREM1Q9H706 876 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 FAM60AQ9NP50 221 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 SEC14L4Q9UDX3 406 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 KLHL3Q9UH77 587 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 SATB2Q9UPW6 733 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 ARHGEF17Q96PE2 2063 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-202ENST00000374487 CENPVL1A0A0U1RR11 272 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 SAGE2PA6NJ88 616 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 APOL3O95236 402 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 THY1P04216 161 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 ST6GAL1P15907 406 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 PTNP21246 168 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 ETV5P41161 510 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 RFX3P48380 749 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 PPM1FP49593 454 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-202ENST00000374487 ETV1P50549 477 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 BCAP31P51572 246 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 MLLT11Q13015 90 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-202ENST00000374487 MAPK14Q16539 360 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 LIPKQ5VXJ0 399 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 GDPGP1Q6ZNW5 385 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 MRGPREQ86SM8 312 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 OR9A4Q8NGU2 314 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 CEP76Q8TAP6 659 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 RFKQ969G6 155 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 ABCB10Q9NRK6 738 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 IL20Q9NYY1 176 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 MAT2BQ9NZL9 334 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 SSR3Q9UNL2 185 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 CARD8Q9Y2G2 431 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
HMGCL-202ENST00000374487 TRAPPC13A5PLN9 417 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 PEX12O00623 359 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 HCRTR1O43613 425 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 PIP5K1CO60331 668 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 MED26O95402 600 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 TSPAN19P0C672 248 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 GKN3PP0CG01 181 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 NID1P14543 1247 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 RNF144AP50876 292 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF136P52737 540 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 RAB38P57729 211 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF45Q02386 682 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 DNASE1L3Q13609 305 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 SHBQ15464 509 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 C3orf38Q5JPI3 329 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 MRPL2Q5T653 305 aaKnown RBP11.21□□□□□ -0.61
HMGCL-202ENST00000374487 GATAD2AQ86YP4 633 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 TMEM9BQ9NQ34 198 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 FBXO34Q9NWN3 711 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 NDUFB11Q9NX14 153 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 IL20RAQ9UHF4 553 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 POMT2Q9UKY4 750 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms