RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PDGFBP01127 241 aaPredicted RBP18.11■□□□□ 0.49
HDAC1-201ENST00000373548 DOC2BQ14184 412 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 ARMCX4Q5H9R4 360 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 PRSS42Q7Z5A4 293 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 GRAMD2AQ8IUY3 354 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 OR4Q3Q8NH05 313 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 OSTF1Q92882 214 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 TMEM80Q96HE8 168 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 ZNF559Q9BR84 538 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 NUDT22Q9BRQ3 303 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 TBC1D23Q9NUY8 699 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 DNAJB12Q9NXW2 375 aaKnown RBP18.11■□□□□ 0.49
HDAC1-201ENST00000373548 GMEB2Q9UKD1 530 aa18.11■□□□□ 0.49
HDAC1-201ENST00000373548 NUP210LQ5VU65 1888 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 A0A1B0GVG6 124 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 C17orf105B2RV13 164 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 ADAM11O75078 769 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 NCF4Q15080 339 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 ZNF141Q15928 474 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 SLC30A6Q6NXT4 461 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 WDR74Q6RFH5 385 aaPredicted RBP18.1■□□□□ 0.49
HDAC1-201ENST00000373548 MED25Q71SY5 747 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 GATAD2AQ86YP4 633 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 TMEM239Q8WW34 195 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 CCDC74AQ96AQ1 378 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 LGALS12Q96DT0 336 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 OCEL1Q9H607 264 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 EVA1AQ9H8M9 152 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 C14orf105Q9NVL8 296 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 MMACHCQ9Y4U1 282 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 FER1L5A0AVI2 2057 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 M0R3G1 203 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 GADD45AP24522 165 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 CSTF2P33240 577 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDAC1-201ENST00000373548 TGFBR1P36897 503 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 BIKQ13323 160 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 MED22Q15528 200 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 ZNF613Q6PF04 617 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 KANSL1Q7Z3B3 1105 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 ARHGAP22Q7Z5H3 698 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 RNF113BQ8IZP6 322 aaKnown RBP18.1■□□□□ 0.49
HDAC1-201ENST00000373548 BCORP1Q8N888 145 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 PFN4Q8NHR9 129 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 PTPMT1Q8WUK0 201 aaPredicted RBP18.1■□□□□ 0.49
HDAC1-201ENST00000373548 SLC38A2Q96QD8 506 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 OR1F2PQ96R84 312 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 KRCC1Q9NPI7 259 aaPredicted RBP18.1■□□□□ 0.49
HDAC1-201ENST00000373548 FLRT3Q9NZU0 649 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 CBLCQ9ULV8 474 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 GPR52Q9Y2T5 361 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 CDH10Q9Y6N8 788 aa18.1■□□□□ 0.49
HDAC1-201ENST00000373548 EFCAB9A8MZ26 197 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 AIREO43918 545 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 HSMCR30P0CW71 290 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 EPHA8P29322 1005 aaPredicted RBP18.09■□□□□ 0.49
HDAC1-201ENST00000373548 GRK5P34947 590 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 ACAA2P42765 397 aaKnown RBP18.09■□□□□ 0.49
HDAC1-201ENST00000373548 RGS6P49758 472 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 FGFBP1Q14512 234 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 MOGQ16653 247 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 PMS2CLQ68D20 193 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 KMT5CQ86Y97 462 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 GPR135Q8IZ08 494 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 CLDN22Q8N7P3 220 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 ZSCAN1Q8NBB4 408 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 RNF217Q8TC41 542 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 DYNC2LI1Q8TCX1 351 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 TSLPQ969D9 159 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 SH3GL3Q99963 347 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 G6PC3Q9BUM1 346 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 TMEM27Q9HBJ8 222 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 PLGRKTQ9HBL7 147 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 PNO1Q9NRX1 252 aaKnown RBP18.09■□□□□ 0.49
HDAC1-201ENST00000373548 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.09■□□□□ 0.49
HDAC1-201ENST00000373548 C20orf141Q9NUB4 165 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 CLEC2DQ9UHP7 191 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 OR10H1Q9Y4A9 318 aa18.09■□□□□ 0.49
HDAC1-201ENST00000373548 IGKV3D-11A0A0A0MRZ8 115 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 MAKP20794 623 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 DSG2Q14126 1118 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 SENP5Q96HI0 755 aaPredicted RBP18.08■□□□□ 0.49
HDAC1-201ENST00000373548 PHOX2BQ99453 314 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 MGLLQ99685 303 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 NDC1Q9BTX1 674 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 DPH1Q9BZG8 443 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 PRODH2Q9UF12 536 aa18.08■□□□□ 0.49
HDAC1-201ENST00000373548 LSM2Q9Y333 95 aaKnown RBP18.08■□□□□ 0.49
HDAC1-201ENST00000373548 A0A0B4J2E0 115 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 A0A1B0GX12 115 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 TTC36A6NLP5 189 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 CH25HO95992 272 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 MSL3P1P0C860 447 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 CKMT1AP12532 417 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 TDGF1P13385 188 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 ATP12AP54707 1039 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 PRKCDQ05655 676 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 PGGHGQ32M88 737 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 SLCO6A1Q86UG4 719 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 SLC34A3Q8N130 599 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 ZNF321PQ8N8H1 164 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms