RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 RFPL4AL1F8VTS6 287 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 H7C0S8 307 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DLL1O00548 723 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 RP2O75695 350 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 GJA1P17302 382 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 NPR2P20594 1047 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ITGA3P26006 1051 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SDHAP31040 664 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ETV5P41161 510 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 EVX1P49640 407 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 RAG2P55895 527 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 UFM1P61960 85 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SFRP5Q5T4F7 317 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 PSAPL1Q6NUJ1 521 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 NCEH1Q6PIU2 408 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 FAM111BQ6SJ93 734 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF783Q6ZMS7 281 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ANKRD33Q7Z3H0 272 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DNAJB7Q7Z6W7 309 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM150AQ86TG1 271 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ZDHHC21Q8IVQ6 265 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SERPINA12Q8IW75 414 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 PXT1Q8NFP0 134 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 PYURFQ96I23 114 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DEFB118Q96PH6 123 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DDOQ99489 341 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MYOCQ99972 504 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SLC25A32Q9H2D1 315 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MID1IP1Q9NPA3 183 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 C19orf12Q9NSK7 152 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 NUDT15Q9NV35 164 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 NDUFB11Q9NX14 153 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 PDP1Q9P0J1 537 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MBD1Q9UIS9 605 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 CA5BQ9Y2D0 317 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DLGAP4Q9Y2H0 992 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ELOVL7A1L3X0 281 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 KRT33AO76009 404 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TOXO94900 526 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 AKR7A3O95154 331 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SERPINA3P01011 423 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 EGFP01133 1207 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SYPP08247 313 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ADRA2AP08913 450 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ADRB3P13945 408 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 UGT2B7P16662 529 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ANXA7P20073 488 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TNFSF4P23510 183 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MST1P26927 711 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 CRABP1P29762 137 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MC4RP32245 332 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 CCR7P32248 378 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TTPAP49638 278 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 FOXA1P55317 472 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 E2F1Q01094 437 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MXD1Q05195 221 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MADCAM1Q13477 382 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 IL18Q14116 193 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TSNQ15631 228 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MAPKAPK3Q16644 382 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ST3GAL2Q16842 350 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF648Q5T619 568 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 LIPJQ5W064 366 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF730Q6ZMV8 503 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ETV3LQ6ZN32 361 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 OTOP2Q7RTS6 562 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF605Q86T29 641 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TGIF2LXQ8IUE1 241 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MISPQ8IVT2 679 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 PLA2G15Q8NCC3 412 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DENND6BQ8NEG7 585 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TRMT10AQ8TBZ6 339 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 GTPBP3Q969Y2 492 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 ORAI1Q96D31 301 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MS4A4EQ96PG1 132 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 GPR21Q99679 349 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 RIMS4Q9H426 269 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 REEP4Q9H6H4 257 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MRPS30Q9NP92 439 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 EXOSC3Q9NQT5 275 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 DUSP22Q9NRW4 184 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 RAD18Q9NS91 495 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 GALPQ9UBC7 116 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 TUBD1Q9UJT1 453 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 CORO2BQ9UQ03 480 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 LSM2Q9Y333 95 aaKnown RBP8.28□□□□□ -1.08
ATG4A-203ENST00000372232 PLEKHM1Q9Y4G2 1056 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 LOC105369274A0A096LPK9 316 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 METTL21EPA6NDL7 271 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SUPT3HB4E1H0 165 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 AZIN1O14977 448 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 OR1I1O60431 355 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 TBL1XO60907 577 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms