RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SLC7A11Q9UPY5 501 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SYT5O00445 386 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SCGNO76038 276 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ITGBL1O95965 494 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 LHCGRP22888 699 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ALDH3B2P48448 385 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 NR0B1P51843 470 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 CTBP2P56545 445 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 DEFA5Q01523 94 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 DLEU7Q6UYE1 221 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SPRYD4Q8WW59 207 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 TEX37Q96LM6 180 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 USP36Q9P275 1121 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ZSCAN5BA6NJL1 495 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SGK494L7N484 410 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 LDB3O75112 727 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 NPPBP16860 134 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 AGTR1P30556 359 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 S100A10P60903 97 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 REEP5Q00765 189 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 TMEM52BQ4KMG9 183 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 RAB12Q6IQ22 244 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF740Q8NDX6 193 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 OR1F2PQ96R84 312 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF471Q9BX82 626 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 VNN3Q9NY84 501 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 B4GALT7Q9UBV7 327 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 PSORS1C1Q9UIG5 152 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ERVK-19Q9WJR5 959 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF443Q9Y2A4 671 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 PCDHGA3Q9Y5H0 932 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 NAP1L6A6NFF2 107 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 SYNGR4O95473 234 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 MAS1P04201 325 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 IGFBP6P24592 240 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 TNFRSF4P43489 277 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 TSFMP43897 325 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 CHRNEQ04844 493 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 SF3A2Q15428 464 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 SPIN3Q5JUX0 258 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 HENMT1Q5T8I9 393 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC6A19Q695T7 634 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 C1orf94Q6P1W5 598 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 DIO2Q92813 273 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 KIAA1143Q96AT1 154 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 MSLNLQ96KJ4 702 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 FKBP14Q9NWM8 211 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 OBP2AQ9NY56 170 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 A6NIZ1 184 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 HSPA12AO43301 675 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 DNAJB6O75190 326 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 XCR1P46094 333 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 RAP1BP61224 184 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 RAP1AP62834 184 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 SPCS2Q15005 226 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 PIP5KL1Q5T9C9 394 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 C1orf189Q5VU69 101 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 RSPO2Q6UXX9 243 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 MEPCEQ7L2J0 689 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 VRK2Q86Y07 508 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 FOXRED2Q8IWF2 684 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 DDIT4LQ96D03 193 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 DUS3LQ96G46 650 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 WDR77Q9BQA1 342 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 UBQLN2Q9UHD9 624 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 KLK8O60259 260 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 EGFP01133 1207 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 CAPNS1P04632 268 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 PGFP49763 221 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 FGL1Q08830 312 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 TP53I3Q53FA7 332 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 ACSM3Q53FZ2 586 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 TMPRSS9Q7Z410 1059 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 DTX3Q8N9I9 347 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 OR52R1Q8NGF1 315 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 HOXB13Q92826 284 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 MYADMQ96S97 322 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 PITX2Q99697 317 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 CD207Q9UJ71 328 aa11.12□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC9B1P1A6NJY1 282 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 GFYI3L273 518 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 RAD51DO75771 328 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CD3GP09693 182 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 PRSS3P35030 304 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 HOXC5Q00444 222 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CHRFAM7AQ494W8 412 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF704Q6ZNC4 412 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 OR13C3Q8NGS6 347 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 SPPL3Q8TCT6 385 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TOE1Q96GM8 510 aaKnown RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 NEDD4LQ96PU5 975 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 SYT4Q9H2B2 425 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 LDAHQ9H6V9 325 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 THAP10Q9P2Z0 257 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms