RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ILKQ13418 452 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GAB1Q13480 694 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CEBPEQ15744 281 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ISXQ2M1V0 245 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DNAL1Q4LDG9 190 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 PIGGQ5H8A4 983 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 C6orf10Q5SRN2 563 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RHBDD2Q6NTF9 364 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DGAT2L6Q6ZPD8 337 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ZNF621Q6ZSS3 439 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 COX15Q7KZN9 410 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 MARCH9Q86YJ5 346 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ULK2Q8IYT8 1036 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GPR135Q8IZ08 494 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FBXW8Q8N3Y1 598 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RNF148Q8N7C7 305 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 OR4A15Q8NGL6 344 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 OR51Q1Q8NH59 317 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 Q8TCH9 128 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DOK4Q8TEW6 326 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 STARD8Q92502 1023 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DVL3Q92997 716 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 KTI12Q96EK9 354 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 VMP1Q96GC9 406 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 AMDHD1Q96NU7 426 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ANKRD27Q96NW4 1050 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 HOPXQ9BPY8 73 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 CPPED1Q9BRF8 314 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 GLIPR2Q9H4G4 154 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 CXorf36Q9H7Y0 433 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RMND5AQ9H871 391 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CLK4Q9HAZ1 481 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FBXO8Q9NRD0 319 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SIRT3Q9NTG7 399 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ACSS1Q9NUB1 689 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ATAD3AQ9NVI7 634 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 MS4A12Q9NXJ0 267 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ABCD2Q9UBJ2 740 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SLC7A8Q9UHI5 535 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ACAD8Q9UKU7 415 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RARRES3Q9UL19 164 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 PCDHGA1Q9Y5H4 931 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 A0A1B0GX78 115 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CFAP73A6NFT4 308 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 H0YIG0 161 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 UBE2CO00762 179 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 POLR1CO15160 346 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 CDC14BO60729 498 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CTNSO60931 367 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CNOT3O75175 753 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 CSO75390 466 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 NME6O75414 186 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 SCRG1O75711 98 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 RASAL1O95294 804 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 GPR75O95800 540 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ONECUT2O95948 504 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ABCB1P08183 1280 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 NR2F1P10589 423 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CSNK2A2P19784 350 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 ITIH1P19827 911 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 TLX1P31314 330 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 RORAP35398 523 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PEX19P40855 299 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 XCR1P46094 333 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 GSK3BP49841 420 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 MVDP53602 400 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 LIMK1P53667 647 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ARSFP54793 590 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CASP9P55211 416 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 FAM3BP58499 235 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 IGLV3-21P80748 117 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 FOLH1Q04609 750 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 LIPEQ05469 1076 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SCARB2Q14108 478 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 IL11RAQ14626 422 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 LTB4RQ15722 352 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR52E8Q6IFG1 317 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 FAM111BQ6SJ93 734 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 CALHM3Q86XJ0 350 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 TMEM126BQ8IUX1 230 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 AMER2Q8N7J2 671 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 DRAXINQ8NBI3 349 aaPredicted RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR4K14Q8NGD5 310 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PSMA8Q8TAA3 256 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 MIPOL1Q8TD10 442 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ZFP90Q8TF47 636 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 WDR60Q8WVS4 1066 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 OR5P2Q8WZ92 322 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 TANKQ92844 425 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 MCUR1Q96AQ8 359 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PPWD1Q96BP3 646 aaKnown RBP3.29□□□□□ -1.88
MCF2-202ENST00000370573 ELP4Q96EB1 424 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 ZNF583Q96ND8 569 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 SLC46A1Q96NT5 459 aa3.29□□□□□ -1.88
MCF2-202ENST00000370573 PANX1Q96RD7 426 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms