RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RPH3AQ9Y2J0 694 aaPredicted RBP13.49□□□□□ -0.25
COL9A1-204ENST00000370496 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 GCN1Q92616 2671 aaKnown RBP13.49□□□□□ -0.25
COL9A1-204ENST00000370496 FREM3P0C091 2139 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 CENPVL1A0A0U1RR11 272 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 A0A1B0GVC2 190 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 B4DXG7 233 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 GTPBP1O00178 669 aaKnown RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 BCKDKO14874 412 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 UGT2B17O75795 530 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 NUDT14O95848 222 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 GUSBP08236 651 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 STSP08842 583 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 HK1P19367 917 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ENDOUP21128 410 aaKnown RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF41P51814 821 aaPredicted RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF117Q03924 483 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 CHRNEQ04844 493 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF141Q15928 474 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 CYP51A1Q16850 503 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 KLHL26Q53HC5 615 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 RPS26P11Q5JNZ5 115 aaPredicted RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 CHERPQ8IWX8 916 aaKnown RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 B4GALNT2Q8NHY0 566 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 SLC38A5Q8WUX1 472 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 MAL2Q969L2 176 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 RCN3Q96D15 328 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 C1GALT1C1Q96EU7 318 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 TMEM19Q96HH6 336 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 SFXN2Q96NB2 322 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ANKRD27Q96NW4 1050 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 SLC39A3Q9BRY0 314 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 THUMPD3Q9BV44 507 aaKnown RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 TRIM8Q9BZR9 551 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 QRSL1Q9H0R6 528 aaKnown RBP13.48□□□□□ -0.25
COL9A1-204ENST00000370496 SLC38A1Q9H2H9 487 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 RUBCNLQ9H714 662 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 A4GALTQ9NPC4 353 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ACAD8Q9UKU7 415 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 VDAC3Q9Y277 283 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF835Q9Y2P0 537 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 SLC6A5Q9Y345 797 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 L3MBTL1Q9Y468 752 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
COL9A1-204ENST00000370496 A0A1B0GUH1 482 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 SERINC4A6NH21 518 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 DCTN3O75935 186 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 AGFG2O95081 481 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 CSTAP01040 98 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 NUDT7P0C024 238 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 BMP2P12643 396 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 MSX1P28360 303 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 CA7P43166 264 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 C3AR1Q16581 482 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 NDUFAF6Q330K2 333 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 RUNDC3AQ59EK9 446 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 WLSQ5T9L3 541 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 GKAP1Q5VSY0 366 aaPredicted RBP13.47□□□□□ -0.25
COL9A1-204ENST00000370496 AAGABQ6PD74 315 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 Q6ZPB1 254 aaPredicted RBP13.47□□□□□ -0.25
COL9A1-204ENST00000370496 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
COL9A1-204ENST00000370496 FJX1Q86VR8 437 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 PEX5LQ8IYB4 626 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 EID3Q8N140 333 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 OR5M9Q8NGP3 310 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 RP9Q8TA86 221 aaKnown RBP13.47□□□□□ -0.25
COL9A1-204ENST00000370496 WDR60Q8WVS4 1066 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 TREX2Q9BQ50 279 aaPredicted RBP13.47□□□□□ -0.25
COL9A1-204ENST00000370496 CCDC106Q9BWC9 280 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 SAP130Q9H0E3 1048 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 KCNE5Q9UJ90 142 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 CARD8Q9Y2G2 431 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 GMEB1Q9Y692 573 aa13.47□□□□□ -0.25
COL9A1-204ENST00000370496 HELZ2Q9BYK8 2649 aaKnown RBP13.47□□□□□ -0.25
COL9A1-204ENST00000370496 FIGNL2A6NMB9 653 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF264O43296 627 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 LRRTM2O43300 516 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-204ENST00000370496 CYP7B1O75881 506 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 FAM107AO95990 144 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 TFPTP0C1Z6 253 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 UBTFL6P0CB48 400 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-204ENST00000370496 ARAFP10398 606 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 ESRRAP11474 423 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-204ENST00000370496 COX4I1P13073 169 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 SUMO3P55854 103 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-204ENST00000370496 SELPLGQ14242 412 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 FGFBP1Q14512 234 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 MAPK14Q16539 360 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 C3P1Q6ZMU1 363 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 PIGWQ7Z7B1 504 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 C10orf111Q8N326 155 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 NFKBIDQ8NI38 313 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 BBS10Q8TAM1 723 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 MYLK2Q9H1R3 596 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms