RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ANKFN1Q8N957 763 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 C11orf65Q8NCR3 313 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 B4GALNT2Q8NHY0 566 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 BBS10Q8TAM1 723 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 NEIL3Q8TAT5 605 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 SLC38A5Q8WUX1 472 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 ECSITQ9BQ95 431 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 CPPED1Q9BRF8 314 aaPredicted RBP12.54□□□□□ -0.4
SSR4-202ENST00000370085 SPATA5L1Q9BVQ7 753 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 DSN1Q9H410 356 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 TMEM38AQ9H6F2 299 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 TAS2R10Q9NYW0 307 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 POLEQ07864 2286 aa12.54□□□□□ -0.4
SSR4-202ENST00000370085 FREM3P0C091 2139 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NPIPA5A0A0B4J1W7 369 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 A0A1B0GTH9 108 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 A0A1B0GVC2 190 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NPIPA7E9PJI5 369 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NPIPB9F8W1W9 429 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 LINC01387J3KSC0 135 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 AQP7O14520 342 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 AIM2O14862 343 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 ZNF264O43296 627 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 SLC19A2O60779 497 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 UGT2B17O75795 530 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 WISP1O95388 367 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NUDT14O95848 222 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 CSTAP01040 98 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 TFPTP0C1Z6 253 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NPIPA8P0DM63 369 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 UQCRBP14927 111 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 GNLYP22749 145 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 ADH7P40394 386 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 MTPNP58546 118 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 CDK6Q00534 326 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 CHRNEQ04844 493 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 FUT5Q11128 374 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 CAPRIN1Q14444 709 aaKnown RBP12.53□□□□□ -0.4
SSR4-202ENST00000370085 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.45e-8■■■□□ 18.1
SSR4-202ENST00000370085 GLYR1Q49A26 553 aaPredicted RBP12.53□□□□□ -0.4
SSR4-202ENST00000370085 WLSQ5T9L3 541 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NANOGP8Q6NSW7 305 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 REEP3Q6NUK4 255 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 ENPP6Q6UWR7 440 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 APOOLQ6UXV4 268 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 SERPINA11Q86U17 422 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 SPPL2CQ8IUH8 684 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 TMCO5AQ8N6Q1 288 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 FADS6Q8N9I5 356 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 GATSQ8NAP1 163 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 FAM83FQ8NEG4 500 aaPredicted RBP12.53□□□□□ -0.4
SSR4-202ENST00000370085 TOR1AIP2Q8NFQ8 470 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 OR2M3Q8NG83 312 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 PRR7Q8TB68 274 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 BCAS4Q8TDM0 211 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 RCN3Q96D15 328 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 TMEM19Q96HH6 336 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 ZNF607Q96SK3 696 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
SSR4-202ENST00000370085 TREX2Q9BQ50 279 aaPredicted RBP12.53□□□□□ -0.4
SSR4-202ENST00000370085 OR2B2Q9GZK3 357 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 SLC38A1Q9H2H9 487 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 NANOGQ9H9S0 305 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 MED11Q9P086 117 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 FBXL2Q9UKC9 423 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 ACAD8Q9UKU7 415 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 ANGPT4Q9Y264 503 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 L3MBTL1Q9Y468 752 aa12.53□□□□□ -0.4
SSR4-202ENST00000370085 HELZ2Q9BYK8 2649 aaKnown RBP12.53□□□□□ -0.4
SSR4-202ENST00000370085 SPENQ96T58 3664 aaKnown RBP12.52□□□□□ -0.41
SSR4-202ENST00000370085 A0A1B0GUH1 482 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 AGAP5A6NIR3 686 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 ACTL6AO96019 429 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 CHRM4P08173 479 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 ARAFP10398 606 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 CD1EP15812 388 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 HK1P19367 917 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 NUDT2P50583 147 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 P2RX1P51575 399 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 CCR4P51679 360 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 KCNC4Q03721 635 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 MRPL49Q13405 166 aaKnown RBP12.52□□□□□ -0.41
SSR4-202ENST00000370085 CBFBQ13951 182 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 SCARB2Q14108 478 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 FGFBP1Q14512 234 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 LIN52Q52LA3 116 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 INTS11Q5TA45 600 aaKnown RBP12.52□□□□□ -0.41
SSR4-202ENST00000370085 ZNF440Q8IYI8 595 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 HIPK4Q8NE63 616 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 BHLHE22Q8NFJ8 381 aaPredicted RBP12.52□□□□□ -0.41
SSR4-202ENST00000370085 C1GALT1C1Q96EU7 318 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 SH3YL1Q96HL8 342 aaPredicted RBP12.52□□□□□ -0.41
SSR4-202ENST00000370085 SFXN2Q96NB2 322 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 PIGQQ9BRB3 760 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 KAT8Q9H7Z6 458 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms