RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ARL14Q8N4G2 192 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 SPEM1Q8N4L4 309 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 LRRC17Q8N6Y2 441 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 ANKRD53Q8N9V6 530 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 OR2T4Q8NH00 348 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 OR51Q1Q8NH59 317 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 OR14A16Q8NHC5 309 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 NEIL3Q8TAT5 605 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 JSRP1Q96MG2 331 aaPredicted RBP4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 LRRC3BQ96PB8 259 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 GFM1Q96RP9 751 aaKnown RBP4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 CNN2Q99439 309 aaKnown RBP4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 MAP3K3Q99759 626 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 RPP25Q9BUL9 199 aaKnown RBP4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 PRRG4Q9BZD6 226 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 DPH1Q9BZG8 443 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 CPNE5Q9HCH3 593 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 PSORS1C1Q9UIG5 152 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 LAMP5Q9UJQ1 280 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 GNG8Q9UK08 70 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 PHYHO14832 338 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PRKYO43930 277 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 CER1O95813 267 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 ECDO95905 644 aaPredicted RBP4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 LGI1O95970 557 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 THBS1P07996 1170 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 GADD45AP24522 165 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PTGER1P34995 402 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 MAGEA2P43356 314 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 ATP12AP54707 1039 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 WNT3P56703 355 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 ISL1P61371 349 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 RAE1P78406 368 aaKnown RBP4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 CD83Q01151 205 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PUM1Q14671 1186 aaKnown RBP eCLIP4.96□□□□□ -1.612e-7■□□□□ 11.2
SMNDC1-202ENST00000369603 OR1Q1Q15612 314 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 LTB4RQ15722 352 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 DUSP7Q16829 419 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF181Q2M3W8 571 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PGGHGQ32M88 737 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PLBD1Q6P4A8 553 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM111BQ6SJ93 734 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 ATCAYQ86WG3 371 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 CPOQ8IVL8 374 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 MSRB3Q8IXL7 192 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 OR7G1Q8NGA0 311 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 RHOXF1Q8NHV9 184 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 THAP4Q8WY91 577 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 GGHQ92820 318 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 TP53INP1Q96A56 240 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PNPLA2Q96AD5 504 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PHOX2BQ99453 314 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM246Q9BRR3 403 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 SPNS1Q9H2V7 528 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 INPP5EQ9NRR6 644 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PPP4R1LQ9P1A2 415 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PRELID1Q9Y255 219 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 PCDHGB6Q9Y5F9 930 aa4.96□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A087WV62 115 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM221A6NGB7 291 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 K7EQS6 105 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SOX1O00570 391 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR2T1O43869 369 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ORC5O43913 435 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 BRINP1O60477 761 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PLOD3O60568 738 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GALR3O60755 368 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC19A2O60779 497 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 YES1P07947 543 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 JMJD7P0C870 316 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC2A2P11168 524 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CA5AP35218 305 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 KIR2DL1P43626 348 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 NR0B1P51843 470 aaKnown RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 EMP2P54851 167 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 RHAGQ02094 409 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CCNJQ5T5M9 372 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLX4IPQ5VYV7 408 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 WBP2NLQ6ICG8 309 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 MBOAT2Q6ZWT7 520 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 KRT77Q7Z794 578 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 MCEMP1Q8IX19 187 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GHDCQ8N2G8 530 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR5M3Q8NGP4 307 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ACOT12Q8WYK0 555 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 RSC1A1Q92681 617 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF486Q96H40 463 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GABARAPL3Q9BY60 117 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR52D1Q9H346 318 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 TP63Q9H3D4 680 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC6A20Q9NP91 592 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ACER3Q9NUN7 267 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 WSB2Q9NYS7 404 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 POU2F3Q9UKI9 436 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 NDRG4Q9ULP0 352 aaKnown RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SPEF1Q9Y4P9 236 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 THSD7BQ9C0I4 1608 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR6C70A6NIJ9 312 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 VSTM2BA6NLU5 285 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms