RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 A0A0G2JNG1 304 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3FA6NER0 549 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3LB9A6J9 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 KIR2DS3K7RE56 304 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 KPNA3O00505 521 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 KLF7O75840 302 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 PRAMEF1O95521 474 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 ELFN1P0C7U0 828 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3HP0C7X1 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 PPP1CAP62136 330 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 ABATP80404 500 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 KIR2DS5Q14953 304 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 PPA1Q15181 289 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TSNQ15631 228 aaKnown RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 LGALSLQ3ZCW2 172 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 SGO1Q5FBB7 561 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3GQ6DHY5 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3CQ6IPX1 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 PYHIN1Q6K0P9 492 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 C3orf33Q6P1S2 294 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 METAP1DQ6UB28 335 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 PIWIL4Q7Z3Z4 852 aaKnown RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 ATCAYQ86WG3 371 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3Q8IZP1 549 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 SIDT2Q8NBJ9 832 aaKnown RBP6.4□□□□□ -1.39
CSDE1-204ENST00000369530 COQ8BQ96D53 544 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 QRFPRQ96P65 431 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 FCRL4Q96PJ5 515 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 CCM2Q9BSQ5 444 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 WDR26Q9H7D7 661 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 GORASP2Q9H8Y8 452 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 ERVK13-1Q9NX77 482 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 SCN3BQ9NY72 215 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 CCDC167Q9P0B6 97 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 MAGEL2Q9UJ55 1249 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 PCDHB14Q9Y5E9 798 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 A0A1B0GVI7 797 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 SERTM1A2A2V5 107 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 TO15178 435 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 SLC31A2O15432 143 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 RASGRP1O95267 797 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 CRYABP02511 175 aaKnown RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 GLAP06280 429 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 SAGP10523 405 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PKMP14618 531 aaKnown RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 JUPP14923 745 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 TTPAP49638 278 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 GSK3BP49841 420 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 TMEM115Q12893 351 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 ECH1Q13011 328 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 CYP51A1Q16850 503 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 UAP1L1Q3KQV9 507 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 CD276Q5ZPR3 534 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 H3F3CQ6NXT2 135 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PDZD3Q86UT5 571 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 KMT5CQ86Y97 462 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 EID2Q8N6I1 236 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 OR5K2Q8NHB8 316 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 CXorf40AQ8TE69 158 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF431Q8TF32 576 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 UCN3Q969E3 161 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 ELP4Q96EB1 424 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 CCDC126Q96EE4 140 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 LINGO1Q96FE5 620 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 HBEGFQ99075 208 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 NTMT1Q9BV86 223 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 C1QTNF3Q9BXJ4 246 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 MRPS30Q9NP92 439 aaKnown RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 RDH8Q9NYR8 311 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 COPZ2Q9P299 210 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 ATXN7L1Q9ULK2 861 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PLCL2Q9UPR0 1127 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PADI2Q9Y2J8 665 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PKD1L2Q7Z442 2459 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 NPEPPSL1A6NEC2 478 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 LRRC14BA6NHZ5 514 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 C9JVG2 144 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 H7C2Y5 167 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 MT-CO3P00414 261 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 HRGP04196 525 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 GAAP10253 952 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 MUC1P15941 1255 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 MAGP20916 626 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 FDXRP22570 491 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PREPP48147 710 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 DUSP3P51452 185 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 IL2P60568 153 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 PLIN5Q00G26 463 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 TOMM20Q15388 145 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 SLC5A12Q1EHB4 618 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 MPEG1Q2M385 716 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 TMEM44Q2T9K0 475 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 RNF165Q6ZSG1 346 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 OR5K1Q8NHB7 308 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 SCMH1Q96GD3 660 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 CRELD1Q96HD1 420 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 SGPP1Q9BX95 441 aa6.39□□□□□ -1.39
CSDE1-204ENST00000369530 MYEF2Q9P2K5 600 aaKnown RBP6.39□□□□□ -1.39
CSDE1-204ENST00000369530 ASH2LQ9UBL3 628 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms