RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NPRL2Q8WTW4 380 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ACY3Q96HD9 319 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OSGEPQ9NPF4 335 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CDC42EP3Q9UKI2 254 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ORM1P02763 201 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LINGO3P0C6S8 592 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 S100A11P31949 105 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PIGPP57054 158 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LIPKQ5VXJ0 399 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RHBDF2Q6PJF5 856 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 BRINP3Q76B58 766 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GPR26Q8NDV2 337 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM175Q9BSA9 504 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GAL3ST2Q9H3Q3 398 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PLEK2Q9NYT0 353 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CRABP1P29762 137 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 IL18Q14116 193 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FAM209BQ5JX69 171 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MEX3DQ86XN8 651 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR5M3Q8NGP4 307 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SMIM4Q8WVI0 70 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR51J1Q9H342 316 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CHMP1AQ9HD42 196 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LILRB3O75022 631 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TRUB2O95900 331 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SNTB2Q13425 540 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 P4HA3Q7Z4N8 544 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CBLN2Q8IUK8 224 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C1orf87Q8N0U7 546 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR52R1Q8NGF1 315 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PHOSPHO2Q8TCD6 241 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C1GALT1C1Q96EU7 318 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CASD1Q96PB1 797 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OSGEPL1Q9H4B0 414 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 UBQLN4Q9NRR5 601 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CAPN5O15484 640 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SIX3O95343 332 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ACP2P11117 423 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SMAD3P84022 425 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ENPP6Q6UWR7 440 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OTOP1Q7RTM1 612 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ISG20Q96AZ6 181 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OAZ3Q9UMX2 235 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PBRM1Q86U86 1689 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GLTPD2A6NH11 291 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LRATO95237 230 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ADRA2CP18825 462 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PAFAH1B2P68402 229 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ALYREFQ86V81 257 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FAM26EQ8N5C1 309 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 B3GALNT2Q8NCR0 500 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR4B1Q8NGF8 309 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GPR152Q8TDT2 470 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 USB1Q9BQ65 265 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TGIF2-C20orf24A0A0A6YYL0 155 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 hCG_1807616A0A1W2PRN6 198 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CD99P14209 185 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CYP2F1P24903 491 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SQSTM1Q13501 440 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR9A2Q8NGT5 310 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 M1APQ8TC57 530 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PHF21BQ96EK2 531 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 XYLT2Q9H1B5 865 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NQO2P16083 231 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PRRC1Q96M27 445 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 DDOQ99489 341 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ARV1Q9H2C2 271 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MIOXQ9UGB7 285 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 COA3Q9Y2R0 106 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 A8MT66 165 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NME6O75414 186 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CCNYL3P0C7X3 344 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 QRICH1Q2TAL8 776 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GPR142Q7Z601 462 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 YIPF5Q969M3 257 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SYT14Q8NB59 555 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CPB2Q96IY4 423 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SIGLEC10Q96LC7 697 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ADAP2Q9NPF8 381 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 WASH6PQ9NQA3 447 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CISHQ9NSE2 258 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MTMR11A4FU01 709 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RBBP9O75884 186 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LIPFP07098 398 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ALDH3B1P43353 468 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ADPRHP54922 357 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 S100A10P60903 97 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 IRF8Q02556 426 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 WDR5BQ86VZ2 330 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 KCNJ15Q99712 375 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GALNT9Q9HCQ5 603 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RP1L1Q8IWN7 2480 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 HSD17B6O14756 317 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 POP4O95707 220 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CXADRP78310 365 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF792Q3KQV3 632 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SLC9B1Q4ZJI4 515 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF620Q6ZNG0 422 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PIGQQ9BRB3 760 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms