RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ADGRG5Q8IZF4 528 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MS4A15Q8N5U1 240 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 OR14A16Q8NHC5 309 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MYEOVQ96EZ4 313 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SAMD8Q96LT4 415 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 C20orf27Q9GZN8 174 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MKRN2Q9H000 416 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 TEX10Q9NXF1 929 aaPredicted RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 DNAJB11Q9UBS4 358 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 TRGV8A0A0C4DH27 118 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 HBA1P69905 142 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ALG10Q5BKT4 473 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 C6orf15Q6UXA7 325 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 MARVELD2Q8N4S9 558 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 NXPE2Q96DL1 559 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ARL5BQ96KC2 179 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PHYHO14832 338 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 OR7A10O76100 309 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 MAGEA8P43361 318 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 MTNR1AP48039 350 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ACTA2P62736 377 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ACTG2P63267 376 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 CSNK1G2P78368 415 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 HTRA4P83105 476 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 MYBPHQ13203 477 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ANKDD1AQ495B1 522 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 METRNLQ641Q3 311 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PRRC1Q96M27 445 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 UBQLN4Q9NRR5 601 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 COQ3Q9NZJ6 369 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF639Q9UID6 485 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 OR5K3A6NET4 321 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 IGHEP01854 428 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 MAP2K4P45985 399 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 RIDAP52758 137 aaKnown RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PYCR3Q53H96 274 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 LAS2Q8IYD9 372 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 BTBD2Q9BX70 525 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 CDCP1Q9H5V8 836 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 TRIM64BA6NI03 449 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 GALR3O60755 368 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 SSR4P51571 173 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 CCR5P51681 352 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 MAP4K2Q12851 820 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ZFP69Q49AA0 526 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 GARNL3Q5VVW2 1013 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PAPD4Q6PIY7 484 aaKnown RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 OR9Q2Q8NGE9 314 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 OR1J4Q8NGS1 313 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 NEIL3Q8TAT5 605 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ACOT11Q8WXI4 607 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PPP1R14BQ96C90 147 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 S100A16Q96FQ6 103 aaKnown RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF845Q96IR2 970 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 OR7D2Q96RA2 312 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 SLC22A4Q9H015 551 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 DEFB127Q9H1M4 99 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 DHDHQ9UQ10 334 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM184BQ9Y519 407 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ARAFP10398 606 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 GNG2P59768 71 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ABHD17CQ6PCB6 329 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 CCL4L1Q8NHW4 92 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 LMF2Q9BU23 707 aaKnown RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ITGB4P16144 1822 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ACVR1BP36896 505 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 OPRD1P41143 372 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 AP2S1P53680 142 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PPP2CBP62714 309 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 PPP2CAP67775 309 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 TRAM1Q15629 374 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 GXYLT1Q4G148 440 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 CBLL1Q75N03 491 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 SCGB3A2Q96PL1 93 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ZDHHC5Q9C0B5 715 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 ENKD1Q9H0I2 346 aa10.85□□□□□ -0.67
SYNE1-204ENST00000367248 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 A0A0X1KG70 313 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 ICAM2P13598 275 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CEACAM19Q7Z692 300 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 KLBQ86Z14 1044 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 LRRC18Q8N456 261 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CCDC107Q8WV48 283 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM121BQ9BXQ6 578 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 METTL8Q9H825 291 aaKnown RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 EVA1AQ9H8M9 152 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 LOXL2Q9Y4K0 774 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 HOXC8P31273 242 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 SWI5Q1ZZU3 235 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 SLC5A7Q9GZV3 580 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CACNA1GO43497 2377 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 F5P12259 2224 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 PRKRAO75569 313 aaKnown RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CNOT4O95628 575 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms