RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TRBV4-1A0A0J9YWV2 114 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 RTCAO00442 366 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 FMO6PO60774 539 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRRT3Q5FWE3 981 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 C3P1Q6ZMU1 363 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 GKN2Q86XP6 184 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 AMBRA1Q9C0C7 1298 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 TSFMP43897 325 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SERTAD2Q14140 314 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 C2orf27AQ580R0 203 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 WDR45BQ5MNZ6 344 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 LRRC69Q6ZNQ3 347 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR52E2Q8NGJ4 325 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ELP4Q96EB1 424 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 RANGRFQ9HD47 186 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRTFDC1Q9NRG1 225 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 AKAIN1P0CW23 69 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 FAM26DQ5JW98 314 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SHFQ7M4L6 423 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 CHST14Q8NCH0 376 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 LCTP09848 1927 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 C13orf42A0A1B0GVH6 325 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 CSTBP04080 98 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 HMGN2P05204 90 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 CDK2P24941 298 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 CD6P30203 668 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 MC3RP41968 323 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC6A8P48029 635 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 LAX1Q8IWV1 398 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ACOT4Q8N9L9 421 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZDHHC12Q96GR4 267 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 B3GAT2Q9NPZ5 323 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC2A4RGQ9NR83 387 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 MYLKQ15746 1914 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 TEX13DA0A0J9YY54 714 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 WASHC1A8K0Z3 465 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 F5H5P2 479 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 CD53P19397 219 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PKLRP30613 574 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 FAM46BQ96A09 425 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 LMF2Q9BU23 707 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PTGES2Q9H7Z7 377 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 GABRPO00591 440 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR6V1Q8N148 313 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR5K2Q8NHB8 316 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ASB13Q8WXK3 278 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 KLK6Q92876 244 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 MBOAT4Q96T53 435 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 HRASLS2Q9NWW9 162 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 TRBV23OR9-2A0A075B6M9 112 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 LIPAP38571 399 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SEC13P55735 322 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GRASPQ7Z6J2 395 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 TIMM29Q9BSF4 260 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 PSME4Q14997 1843 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 CSN2P05814 226 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 HTR1FP30939 366 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 FCRL1Q96LA6 429 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 LRFN5Q96NI6 719 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 PBDC1Q9BVG4 233 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GIFP27352 417 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 UQCRC1P31930 480 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 IDUAP35475 653 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 ARSBP15848 533 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 PGCP20142 388 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC1A3P43003 542 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 XCR1P46094 333 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 UAP1L1Q3KQV9 507 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 IL17FQ96PD4 163 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SPATA6Q9NWH7 488 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GDE1Q9NZC3 331 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 IGLV3-27P01718 113 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 FPR3P25089 353 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 TACR1P25103 407 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 NXNL2Q5VZ03 156 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 FAHD1Q6P587 224 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 BPIFA2Q96DR5 249 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 CTRCQ99895 268 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 FEZF1A0PJY2 475 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 IGLON5A6NGN9 336 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF736B4DX44 427 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SULT1B1O43704 296 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 MSL3P1P0C860 447 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 ACSM3Q53FZ2 586 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC7A5P1Q8MH63 180 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF337Q9Y3M9 751 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRSS21Q9Y6M0 314 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 THSD7AQ9UPZ6 1657 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GASTP01350 101 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 HOXB2P14652 356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms