RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 TCHHL1Q5QJ38 904 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-209ENST00000366735 C6orf136Q5SQH8 315 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 FAM111BQ6SJ93 734 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 OR2T11Q8NH01 316 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 TMBIM1Q969X1 311 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 CTHRC1Q96CG8 243 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 TUBGCP3Q96CW5 907 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 PPP3R2Q96LZ3 170 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 SLC39A3Q9BRY0 314 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 MED18Q9BUE0 208 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 PPP4R1LQ9P1A2 415 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 UTS2RQ9UKP6 389 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 PTGDR2Q9Y5Y4 395 aa11.23□□□□□ -0.61
MRPL55-209ENST00000366735 SLC22A20A6NK97 555 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 A8MXE2 369 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 LINC01387J3KSC0 135 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 RGS14O43566 566 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 HCRTR2O43614 444 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 COQ9O75208 318 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 PDYNP01213 254 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 ALDOCP09972 364 aaKnown RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 COX4I1P13073 169 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 IDO1P14902 403 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 PRPH2P23942 346 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 DPP4P27487 766 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 SOX18P35713 384 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 GSTM5P46439 218 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 EMDP50402 254 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 PNLIPRP2P54317 469 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 DSCR4P56555 118 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 EMX2Q04743 252 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 MGAT2Q10469 447 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 CSTF3Q12996 717 aaKnown RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 HEPACAMQ14CZ8 416 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 GLIPR1L2Q4G1C9 344 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 ATP6AP1LQ52LC2 224 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 C20orf204Q6ZNR8 217 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 C1orf52Q8N6N3 182 aaKnown RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 CNEP1R1Q8N9A8 125 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 WDSUB1Q8N9V3 476 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 SIMC1Q8NDZ2 872 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 RP9Q8TA86 221 aaKnown RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 NUDT8Q8WV74 236 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 CNRIP1Q96F85 164 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 ADOQ96SZ5 270 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 CCL19Q99731 98 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 BDH2Q9BUT1 245 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 C1orf21Q9H246 121 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 SDR39U1Q9NRG7 319 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 SDHAF3Q9NRP4 125 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 ASIC5Q9NY37 505 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 ELOVL5Q9NYP7 299 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 TAS2R9Q9NYW1 312 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 VPS29Q9UBQ0 182 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 MCM8Q9UJA3 840 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 GPR55Q9Y2T6 319 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-209ENST00000366735 OR10H1Q9Y4A9 318 aa11.22□□□□□ -0.61
MRPL55-209ENST00000366735 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 GNG14A0A1W2PPG7 69 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 LSM1O15116 133 aaKnown RBP11.21□□□□□ -0.61
MRPL55-209ENST00000366735 TNFSF13O75888 250 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 SLITRK5O94991 958 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 FCGR2AP12318 317 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 POU2F1P14859 743 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 CD79BP40259 229 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 MC3RP41968 323 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 KCNJ5P48544 419 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 CLK3P49761 638 aaKnown RBP11.21□□□□□ -0.61
MRPL55-209ENST00000366735 CLDN18P56856 261 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 STX1BP61266 288 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.61
MRPL55-209ENST00000366735 MAPRE2Q15555 327 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 LTB4RQ15722 352 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 C11orf91Q3C1V1 193 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 TRMT12Q53H54 448 aaKnown RBP11.21□□□□□ -0.61
MRPL55-209ENST00000366735 SPIN4Q56A73 249 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 ZNF628Q5EBL2 1059 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 RAET1LQ5VY80 246 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 FAM219BQ5XKK7 198 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 PRSS57Q6UWY2 283 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 FAM9CQ8IZT9 166 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 TM4SF18Q96CE8 201 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 METTL2AQ96IZ6 378 aaKnown RBP11.21□□□□□ -0.61
MRPL55-209ENST00000366735 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 PTGES2Q9H7Z7 377 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 UBTD1Q9HAC8 227 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 FANCFQ9NPI8 374 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 AIG1Q9NVV5 245 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 STOML1Q9UBI4 398 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 FBXL2Q9UKC9 423 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 MRTO4Q9UKD2 239 aaKnown RBP11.21□□□□□ -0.61
MRPL55-209ENST00000366735 ABCG2Q9UNQ0 655 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 GPR45Q9Y5Y3 372 aa11.21□□□□□ -0.61
MRPL55-209ENST00000366735 PCNX3Q9H6A9 2034 aa11.2□□□□□ -0.62
MRPL55-209ENST00000366735 NSD1Q96L73 2696 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-209ENST00000366735 B2RBV5 119 aa11.2□□□□□ -0.62
MRPL55-209ENST00000366735 PCDH7O60245 1069 aa11.2□□□□□ -0.62
MRPL55-209ENST00000366735 TSPAN2O60636 221 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms