RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SF3B4Q15427 424 aaKnown RBP eCLIP17.43■□□□□ 0.385e-9■■■■■ 35
CLIP2-202ENST00000361545 TP53I3Q53FA7 332 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 METTL25Q8N6Q8 603 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 OR5AK2Q8NH90 309 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 SPTSSAQ969W0 71 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF700Q9H0M5 742 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 TEX10Q9NXF1 929 aaPredicted RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 PTPRZ1P23471 2315 aaPredicted RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 C12orf71A8MTZ7 269 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 G3V3Y1 287 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ANKRD28O15084 1053 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 AMY2BP19961 511 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 TACR1P25103 407 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 SLC5A2P31639 672 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF160Q9HCG1 818 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 FGF22Q9HCT0 170 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM181Q9P2C4 612 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 MYEF2Q9P2K5 600 aaKnown RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ICKQ9UPZ9 632 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 TRAV27A0A087WT01 109 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 CD46P15529 392 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ABOP16442 354 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 NKX3-2P78367 333 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 PYHIN1Q6K0P9 492 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 SLC35F2Q8IXU6 374 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 TRMT10AQ8TBZ6 339 aaKnown RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ADAMTS16Q8TE57 1224 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 FOXN4Q96NZ1 517 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 CHRNEQ04844 493 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 SQSTM1Q13501 440 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 CCSMST1Q4G0I0 132 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 C3orf38Q5JPI3 329 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 SFXN5Q8TD22 340 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 LGALS12Q96DT0 336 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 C12orf4Q9NQ89 552 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 PLEK2Q9NYT0 353 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 MMP17Q9ULZ9 603 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 OR7A17O14581 309 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 PRKRAO75569 313 aaKnown RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 CXCL10P02778 98 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 APLNRP35414 380 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 RPS5P46782 204 aaKnown RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 TNFRSF17Q02223 184 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 FAM111BQ6SJ93 734 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 OR1E3Q8WZA6 343 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF443Q9Y2A4 671 aaPredicted RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ANXA3P12429 323 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 CSNK1A1P48729 337 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 SLC25A25Q6KCM7 469 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 SLCO4C1Q6ZQN7 724 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 EGFL6Q8IUX8 553 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 PRRC1Q96M27 445 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 MMP27Q9H306 513 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 EIF2DP41214 584 aaKnown RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 C9orf135Q5VTT2 229 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 C18orf63Q68DL7 685 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 LINC00696Q6ZRV3 163 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ADIPOR2Q86V24 386 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF775Q96BV0 537 aaPredicted RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 LMF1Q96S06 567 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM45AQ9NWC5 275 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 WBP1LQ9NX94 342 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 SLAMF8Q9P0V8 285 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 A6NIZ1 184 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ARNTLO00327 626 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 FOXE1O00358 373 aaPredicted RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ALDOCP09972 364 aaKnown RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 LHCGRP22888 699 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 IDUAP35475 653 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 MAGEA3P43357 314 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 PSMA6P60900 246 aaKnown RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 RAP1BP61224 184 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 RAP1AP62834 184 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 KCNJ10P78508 379 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 ENTPD8Q5MY95 495 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 OGFRL1Q5TC84 451 aaPredicted RBP17.42■□□□□ 0.38
CLIP2-202ENST00000361545 AWAT2Q6E213 333 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM64Q6YI46 380 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 C14orf119Q9NWQ9 140 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 STUB1Q9UNE7 303 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 HS3ST3A1Q9Y663 406 aa17.42■□□□□ 0.38
CLIP2-202ENST00000361545 BLACEA4D250 179 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 TVP23AA6NH52 213 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 FBXO45P0C2W1 286 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 STOMP27105 288 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 GLO1Q04760 184 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 MS4A15Q8N5U1 240 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 NUDT22Q9BRQ3 303 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 INIPQ9NRY2 104 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 GYPBP06028 91 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 SMAD4Q13485 552 aaKnown RBP17.41■□□□□ 0.38
CLIP2-202ENST00000361545 MOGQ16653 247 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 MANEAQ5SRI9 462 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 SYCE2Q6PIF2 218 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 MRPL21Q7Z2W9 205 aaKnown RBP17.41■□□□□ 0.38
CLIP2-202ENST00000361545 TRAPPC6BQ86SZ2 158 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 OR14A16Q8NHC5 309 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 C1GALT1Q9NS00 363 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM30AQ9NV96 361 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 ANKRD12Q6UB98 2062 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms