RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SLC46A1Q96NT5 459 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 AGPAT4Q9NRZ5 378 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 VDAC3Q9Y277 283 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 IER3IP1Q9Y5U9 82 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 PMF1-BGLAPU3KQ54 211 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 H3BSH0 61 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SLC35E2P0CK97 266 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 T-ENOLP0DO92 83 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 GTF2F2P13984 249 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CR2P20023 1033 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CXCR4P61073 352 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SLC6A19Q695T7 634 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 RFLNAQ6ZTI6 216 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SLC35F2Q8IXU6 374 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 GALNT6Q8NCL4 622 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 OR9Q2Q8NGE9 314 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 AKAP1Q92667 903 aaKnown RBP eCLIP12.63□□□□□ -0.39
LDB3-202ENST00000361373 SPHK1Q9NYA1 384 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 GPR83Q9NYM4 423 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SIGLEC6O43699 453 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CPNE6O95741 557 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 TNFRSF1BP20333 461 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 MECP2P51608 486 aaKnown RBP12.63□□□□□ -0.39
LDB3-202ENST00000361373 PCBD1P61457 104 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 MLC1Q15049 377 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 ZNF181Q2M3W8 571 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 OR7G1Q8NGA0 311 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 ZNF417Q8TAU3 575 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 P2RY12Q9H244 342 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CNIH4Q9P003 139 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 C12orf71A8MTZ7 269 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 ZNF264O43296 627 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SYT7O43581 403 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 GDF1P27539 372 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 ACTBP60709 375 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 ACTG1P63261 375 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 NLGN4XQ8N0W4 816 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 PAPD5Q8NDF8 572 aaKnown RBP12.63□□□□□ -0.39
LDB3-202ENST00000361373 GPR148Q8TDV2 347 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CNOT2Q9NZN8 540 aaKnown RBP12.63□□□□□ -0.39
LDB3-202ENST00000361373 MYH7BA7E2Y1 1941 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CTNSO60931 367 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 OR1D4P47884 311 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SLC22A16Q86VW1 577 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 CPPED1Q9BRF8 314 aaPredicted RBP12.63□□□□□ -0.39
LDB3-202ENST00000361373 FAM86C1Q9NVL1 165 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 ASIC5Q9NY37 505 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 PADI1Q9ULC6 663 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SLC22A7Q9Y694 548 aa12.63□□□□□ -0.39
LDB3-202ENST00000361373 SLC5A10A0PJK1 596 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 SLC35F4A4IF30 521 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 EPHA4P54764 986 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 UTS2BQ765I0 119 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 SLC6A18Q96N87 628 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 PBX4Q9BYU1 374 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 APLNRP35414 380 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 POU3F4P49335 361 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 PLAG1Q6DJT9 500 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ADIPOR2Q86V24 386 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 LAS2Q8IYD9 372 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 MMP21Q8N119 569 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 SPERTQ8NA61 448 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 INTS14Q96SY0 518 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 TREX2Q9BQ50 279 aaPredicted RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 MYO18AQ92614 2054 aaKnown RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 SYT5O00445 386 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 FURINP09958 794 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ITGAMP11215 1152 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 SLC5A2P31639 672 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 MAGEA2P43356 314 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 IST1P53990 364 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ECH1Q13011 328 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 CDK5R2Q13319 367 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 OR7A5Q15622 319 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 TMEM244Q5VVB8 128 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 FRS2Q8WU20 508 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 SLC6A15Q9H2J7 730 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 GPN2Q9H9Y4 310 aaPredicted RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 PDFQ9HBH1 243 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ZNF701Q9NV72 531 aaPredicted RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ATG12O94817 140 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ALDOCP09972 364 aaKnown RBP12.62□□□□□ -0.39
LDB3-202ENST00000361373 LHCGRP22888 699 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 CSNK1G2P78368 415 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 RSU1Q15404 277 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 SHISA6Q6ZSJ9 500 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 ALG8Q9BVK2 526 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 LYRM4Q9HD34 91 aa12.62□□□□□ -0.39
LDB3-202ENST00000361373 AMY2BP19961 511 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR1Q1Q15612 314 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ZNF442Q9H7R0 627 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms