RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 IL1F10Q8WWZ1 152 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 TFAP2BQ92481 460 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 DNAJB11Q9UBS4 358 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SDC3O75056 442 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SPARTQ8N0X7 666 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 OR4K13Q8NH42 304 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 FEVQ99581 238 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 COQ4Q9Y3A0 265 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ADAM12O43184 909 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 TRHRP34981 398 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 RIPK3Q9Y572 518 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 OR1A2Q9Y585 309 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SCO2O43819 266 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 HSD17B1P14061 328 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SF3B4Q15427 424 aaKnown RBP eCLIP8.8□□□□□ -11e-6■■■□□ 17.8
VPS13A-203ENST00000360280 FBXW12Q6X9E4 464 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SENP5Q96HI0 755 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 ZMAT5Q9UDW3 170 aaKnown RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 TOX4O94842 621 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 NDUFB2O95178 105 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ITGB2P05107 769 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 LCN10Q6JVE6 187 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 FAM217AQ8IXS0 508 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 KDM8Q8N371 416 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 PRRC1Q96M27 445 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 MTHFD2LQ9H903 347 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 SALL4Q9UJQ4 1053 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SLC22A7Q9Y694 548 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A6P0DMU7 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A5P0DMU8 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A7P0DMV0 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A8P0DMV1 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A9P0DMV2 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ARL2P36404 184 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 PPT1P50897 306 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A2Q5DJT8 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A1Q5HYN5 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 PPP2R2DQ66LE6 453 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CT45A3Q8NHU0 189 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 INPP5EQ9NRR6 644 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CNTRLQ7Z7A1 2325 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 KIF13BQ9NQT8 1826 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ANHXE9PGG2 379 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 KDELR3O43731 214 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 GIFP27352 417 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ZNF266Q14584 549 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 MICAQ29983 383 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 IGFN1Q86VF2 1251 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SLC7A5P1Q8MH63 180 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ZFP41Q8N8Y5 198 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 Q8N9G6 341 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 GABARAPH6UMI1 98 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 GABARAPO95166 117 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 RPS21P63220 83 aaKnown RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 IRF2BP1Q8IU81 584 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 MS4A4EQ96PG1 132 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 THSD1Q9NS62 852 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 OR5K4A6NMS3 321 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 CHEK1O14757 476 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PREPP48147 710 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 FAM173AQ9BQD7 235 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 CUTCQ9NTM9 273 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PLAGL1Q9UM63 463 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 A8MU76 341 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 RPS18P62269 152 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 FAM74A1Q5RGS3 127 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SUSD1Q6UWL2 747 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.79□□□□□ -1
VPS13A-203ENST00000360280 DBF4BQ8NFT6 615 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 OR5L1Q8NGL2 311 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 TMPRSS5Q9H3S3 457 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PRELID3BQ9Y3B1 194 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 KLRG2A4D1S0 409 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 MT-ND4P03905 459 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 TBPL1P62380 186 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PLAG1Q6DJT9 500 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 OR10A5Q9H207 317 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 OR10A2Q9H208 303 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 HRASLS2Q9NWW9 162 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 DDX60Q8IY21 1712 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 FLI1Q01543 452 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 PRSS55Q6UWB4 352 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 ENPP6Q6UWR7 440 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 KDF1Q8NAX2 398 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 KREMEN2Q8NCW0 462 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SCAMP5Q8TAC9 235 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 NOX3Q9HBY0 568 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 GPR52Q9Y2T5 361 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 POMT1Q9Y6A1 747 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 ELK1P19419 428 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 ASB17Q8WXJ9 295 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PTCHD1Q96NR3 888 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 SLC6A8P48029 635 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 DHPSP49366 369 aaPredicted RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 RPS24P62847 133 aaKnown RBP8.79□□□□□ -1
VPS13A-203ENST00000360280 MPEG1Q2M385 716 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 C22orf39Q6P5X5 142 aa8.79□□□□□ -1
VPS13A-203ENST00000360280 PXT1Q8NFP0 134 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms