RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CD63P08962 238 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CCR9P51686 369 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SFXN4Q6P4A7 337 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 A0A0G2JN53 185 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TRBV4-1A0A0J9YWV2 114 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SYT5O00445 386 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 NDUFS4O43181 175 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 STK19P49842 368 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 UBE2IP63279 158 aaKnown RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CLDN19Q8N6F1 224 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PROKR1Q8TCW9 393 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 THAP4Q8WY91 577 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZBTB8AQ96BR9 441 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TAPBPLQ9BX59 468 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ALOXE3Q9BYJ1 711 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 KHNYNO15037 678 aaKnown RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PRSS3P35030 304 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SRP9P49458 86 aaKnown RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TNK1Q13470 666 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 XAF1Q6GPH4 301 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM220Q6QAJ8 160 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 HMGN2P46Q86SG4 172 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM150AQ86TG1 271 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CACUL1Q86Y37 369 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC35F3Q8IY50 421 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PLPP5Q8NEB5 264 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GPR152Q8TDT2 470 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC35F5Q8WV83 523 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 YIPF5Q969M3 257 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF583Q96ND8 569 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ICKQ9UPZ9 632 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 BHLHE40O14503 412 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 F10P00742 488 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF44P15621 663 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GABRA5P31644 462 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CATSPERGQ6ZRH7 1159 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC16A12Q6ZSM3 486 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 NAA40Q86UY6 237 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OR4K1Q8NGD4 311 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 RNF141Q8WVD5 230 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TAC3Q9UHF0 121 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 UTS2RQ9UKP6 389 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 MYBPHLA2RUH7 354 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 MROH6A6NGR9 719 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 A8MVJ9 347 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SLC16A8O95907 504 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TGFB1P01137 390 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 STATHP02808 62 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TGFBR1P36897 503 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 FAM189BP81408 668 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 MAPK14Q16539 360 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GPR139Q6DWJ6 353 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 LPCAT3Q6P1A2 487 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 RDH10Q8IZV5 341 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF709Q8N972 641 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 CDCA4Q9BXL8 241 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GABARAPL3Q9BY60 117 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 LAMP5Q9UJQ1 280 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 RIPK3Q9Y572 518 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 LRRK2Q5S007 2527 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PHYHO14832 338 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ATP1B1P05026 303 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OR12D1P0DN82 309 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 BMPR1AP36894 532 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SERINC3Q13530 473 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 EBPQ15125 230 aaKnown RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ALG10Q5BKT4 473 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF789Q5FWF6 425 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 VASNQ6EMK4 673 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PRSS55Q6UWB4 352 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SAMD7Q7Z3H4 446 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 C1orf87Q8N0U7 546 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 OR5M3Q8NGP4 307 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 HCAR2Q8TDS4 363 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SMPDL3BQ92485 455 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 UCN3Q969E3 161 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PHPT1Q9NRX4 125 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 PLCXD1Q9NUJ7 323 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 GPX5O75715 221 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 MTNR1BP49286 362 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 RBM39Q14498 530 aaKnown RBP5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM88Q6PEY1 159 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SSX7Q7RTT5 188 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 FAM83CQ9BQN1 747 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 BABAM2Q9NXR7 383 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 REV1Q9UBZ9 1251 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SCML1Q9UN30 329 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 TRAPPC4Q9Y296 219 aa5.74□□□□□ -1.49
VPS13B-203ENST00000358544 SGSHP51688 502 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 DACT2Q5SW24 774 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SLC8B1Q6J4K2 584 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CCDC190Q86UF4 302 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PHYKPLQ8IUZ5 450 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 MRPS23Q9Y3D9 190 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 UMAD1C9J7I0 102 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SLC2A5P22732 501 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 EPHA5P54756 1037 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TBPL2Q6SJ96 375 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms