RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FGFBP1Q14512 234 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 SPATS1Q496A3 300 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 ZNF311Q5JNZ3 666 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 FNDC7Q5VTL7 733 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 GLYATQ6IB77 296 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 SLC30A6Q6NXT4 461 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.58□□□□□ -0.24
CCNE1-202ENST00000357943 KRT73Q86Y46 540 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 SMYD1Q8NB12 490 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 OR2M7Q8NG81 312 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 DUSP19Q8WTR2 217 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 TAMM41Q96BW9 452 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 CCDC124Q96CT7 223 aaKnown RBP13.58□□□□□ -0.24
CCNE1-202ENST00000357943 FRMD6Q96NE9 622 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 RLIMQ9NVW2 624 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 ZNF443Q9Y2A4 671 aaPredicted RBP13.58□□□□□ -0.24
CCNE1-202ENST00000357943 CHST2Q9Y4C5 530 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 ATRXP46100 2492 aa13.58□□□□□ -0.24
CCNE1-202ENST00000357943 KLRC4-KLRK1H3BQV0 150 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 GNB5O14775 395 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 TRIM3O75382 744 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 SNX4O95219 450 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 SFTPCP11686 197 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 NID1P14543 1247 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 NQO1P15559 274 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 ME2P23368 584 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 KDELR2P33947 212 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 RFC3P40938 356 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 MEOX1P50221 254 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 KCNJ10P78508 379 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PMP22Q01453 160 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 FOXO1Q12778 655 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 NDUFAF6Q330K2 333 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 MRPL2Q5T653 305 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PGM2L1Q6PCE3 622 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PATL1Q86TB9 770 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 ARMC8Q8IUR7 673 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 ULK2Q8IYT8 1036 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 WDSUB1Q8N9V3 476 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 WDR60Q8WVS4 1066 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 MCUR1Q96AQ8 359 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 WBP1Q96G27 269 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 JSRP1Q96MG2 331 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 FAM173AQ9BQD7 235 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 TUBA8Q9NY65 449 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 SEC14L3Q9UDX4 400 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 IFT52Q9Y366 437 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 EML6Q6ZMW3 1958 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 TLN1Q9Y490 2541 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 GMFGO60234 142 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 TPST1O60507 370 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 SERPINB7O75635 380 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PDE9AO76083 593 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 THBS1P07996 1170 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 MASP1P48740 699 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 MS4A2Q01362 244 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 C17orf67Q0P5P2 114 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 LARS2Q15031 903 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 DUSP7Q16829 419 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 CBLN3Q6UW01 205 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 ZNF836Q6ZNA1 936 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 EIF3MQ7L2H7 374 aaKnown RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 COMTD1Q86VU5 262 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 CLIP4Q8N3C7 705 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 TEX19Q8NA77 164 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 Q8NA96 180 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 OIT3Q8WWZ8 545 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PNPLA2Q96AD5 504 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 SH3YL1Q96HL8 342 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 GNRHR2Q96P88 292 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 SPATA5L1Q9BVQ7 753 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PPP4R1LQ9P1A2 415 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 CARD8Q9Y2G2 431 aa13.57□□□□□ -0.24
CCNE1-202ENST00000357943 PRRC2CQ9Y520 2896 aaKnown RBP13.56□□□□□ -0.24
CCNE1-202ENST00000357943 LRRC3CA6NJW4 275 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 TMEM229AB2RXF0 380 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 H3BNH8 94 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 SNPHO15079 494 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 ARPC2O15144 300 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 OIP5O43482 229 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 EPPINO95925 133 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 CSTAP01040 98 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 UBTFL6P0CB48 400 aaPredicted RBP13.56□□□□□ -0.24
CCNE1-202ENST00000357943 UBL4AP11441 157 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 ADH7P40394 386 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 ZNF117Q03924 483 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 BNIP2Q12982 314 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
CCNE1-202ENST00000357943 TIGD3Q6B0B8 471 aa13.56□□□□□ -0.24
CCNE1-202ENST00000357943 MISPQ8IVT2 679 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms