RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ZNF707Q96C28 371 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-205ENST00000357568 IFT27Q9BW83 186 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 S1PR5Q9H228 398 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 RPS6KB2Q9UBS0 482 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 PFDN2Q9UHV9 154 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 RASD1Q9Y272 281 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 TMEM5Q9Y2B1 443 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ZNF175Q9Y473 711 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ANAPC1Q9H1A4 1944 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 C2orf92A0A1B0GVN3 265 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ABCD4O14678 606 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 GREM1O60565 184 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 SC5DO75845 299 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ECDO95905 644 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-205ENST00000357568 KHKP50053 298 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 MECP2P51608 486 aaKnown RBP9.95□□□□□ -0.82
CAPN3-205ENST00000357568 BLVRAP53004 296 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 MANFP55145 182 aaKnown RBP9.95□□□□□ -0.82
CAPN3-205ENST00000357568 POLR2LP62875 67 aaKnown RBP9.95□□□□□ -0.82
CAPN3-205ENST00000357568 FLI1Q01543 452 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-205ENST00000357568 TMEM151BQ8IW70 566 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 OR6V1Q8N148 313 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 CPXM2Q8N436 756 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ACBD7Q8N6N7 88 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 OR6C4Q8NGE1 309 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 PIGXQ8TBF5 258 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 SMIM4Q8WVI0 70 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ASB13Q8WXK3 278 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 WBP2Q969T9 261 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 LINC00052Q96N35 136 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 ARHGDIGQ99819 225 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 OR51B5Q9H339 312 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 IFT46Q9NQC8 304 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 CD207Q9UJ71 328 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 DENND4AQ7Z401 1863 aa9.95□□□□□ -0.82
CAPN3-205ENST00000357568 A0A087WUU8 490 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 LOC105369274A0A096LPK9 316 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 ARPC4-TTLL3A0A0A6YYG9 625 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 A0A0G2JPF8 293 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 FAM25EA8MYX2 175 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 HNRNPCL2B2RXH8 293 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 HNRNPCL3B7ZW38 293 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 KLF4O43474 513 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 TGFB1P01137 390 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 HNRNPCL4P0DMR1 293 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 IRF1P10914 325 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 LTBRP36941 435 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 OMPP47874 163 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 TRA2BP62995 288 aaKnown RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DBPQ10586 325 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 MAPK14Q16539 360 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DECR1Q16698 335 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 LIPIQ6XZB0 460 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 TMEM64Q6YI46 380 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 KLBQ86Z14 1044 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 OR4N4Q8N0Y3 316 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 OR4F15Q8NGB8 312 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 WFDC5Q8TCV5 224 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 SFXN5Q8TD22 340 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 ZNF480Q8WV37 535 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 C20orf85Q9H1P6 137 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 RHBGQ9H310 441 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 EGLN3Q9H6Z9 239 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 UBE2ZQ9H832 354 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 ADAM29Q9UKF5 820 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 BAIAP2Q9UQB8 552 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DNMT3AQ9Y6K1 912 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 A0A1B0GW55 424 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 HMSDA8MTL9 139 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 M0R3H8 397 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 CCL16O15467 120 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 STX11O75558 287 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 OR2A4O95047 310 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 C1orf105O95561 183 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 LDOC1O95751 146 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 IL5P05113 134 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 NMBP08949 121 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DUX4L2P0CJ85 424 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DUX4L3P0CJ86 424 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DUX4L4P0CJ87 422 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DUX4L5P0CJ88 424 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DUX4L6P0CJ89 424 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 DUX4L7P0CJ90 424 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 MAPK3P27361 379 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 SSTR2P30874 369 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 GKP32189 559 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 AP3S2P59780 193 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 TSPAN5P62079 268 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 CRYZQ08257 329 aaKnown RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 BTN1A1Q13410 526 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 TAF12Q16514 161 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 ZNF791Q3KP31 576 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 SPDYE7PQ495Y7 208 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 ZNF658BQ4V348 819 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-205ENST00000357568 TCTE1Q5JU00 501 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 SHEQ5VZ18 495 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 KRT78Q8N1N4 520 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 SLC44A3Q8N4M1 653 aa9.94□□□□□ -0.82
CAPN3-205ENST00000357568 FIBINQ8TAL6 211 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms