RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 CREBZFQ9NS37 354 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 HAO2Q9NYQ3 351 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NDUFAF4Q9P032 175 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 RIMS3Q9UJD0 308 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NFS1Q9Y697 457 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CICQ96RK0 1608 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 CDHR4A6H8M9 788 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 C12orf71A8MTZ7 269 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CLIC3O95833 236 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 MPIG6BO95866 241 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 IGHG1P01857 330 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 FGF4P08620 206 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CD46P15529 392 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ARSBP15848 533 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 GDF1P27539 372 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CD70P32970 193 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CNR2P34972 360 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 TSFMP43897 325 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 SGSHP51688 502 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 TAS2R46P59540 309 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PLCXD3Q63HM9 321 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 SFRP4Q6FHJ7 346 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 PM20D1Q6GTS8 502 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 GPRIN1Q7Z2K8 1008 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 LRP10Q7Z4F1 713 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 MISPQ8IVT2 679 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 MUL1Q969V5 352 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 SENP5Q96HI0 755 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 FUNDC2Q9BWH2 189 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PPIL3Q9H2H8 161 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 DYNLRB1Q9NP97 96 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 IGSF5Q9NSI5 407 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 MARCH4Q9P2E8 410 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ATG4BQ9Y4P1 393 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 COL2A1P02458 1487 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 C17orf112F2Z3M2 114 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 YKT6O15498 198 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 SNNO75324 88 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 KNG1P01042 644 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 GAAP10253 952 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 LAMP1P11279 417 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CPOXP36551 454 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PEA15Q15121 130 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 LTB4RQ15722 352 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 MPEG1Q2M385 716 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 SLX4IPQ5VYV7 408 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ANKRD54Q6NXT1 300 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 KCNIP4Q6PIL6 250 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 C6orf89Q6UWU4 347 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 NCCRP1Q6ZVX7 275 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 MKXQ8IYA7 352 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CLECL1Q8IZS7 167 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 OR4N2Q8NGD1 307 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PHOSPHO2Q8TCD6 241 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ADAMTS14Q8WXS8 1223 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 LMF1Q96S06 567 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PCYT2Q99447 389 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 BTBD2Q9BX70 525 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 DPH1Q9BZG8 443 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 LIN28AQ9H9Z2 209 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 PAQR5Q9NXK6 330 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 PRELID3BQ9Y3B1 194 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PTRH2Q9Y3E5 179 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 DNAJC15Q9Y5T4 150 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 MYOCOSA0A1B0GUC4 107 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 LOC285095A0A1B0GVY8 99 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 F8W036 122 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 TRAPPC2LH3BP13 241 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ZNF701M0R085 212 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 SLC43A1O75387 559 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 NFYAP23511 347 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 CD79BP40259 229 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 P2RY2P41231 377 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 TAS2R30P59541 319 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 DBPQ10586 325 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 OR7A5Q15622 319 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ZNF791Q3KP31 576 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 C6orf183Q5T699 404 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 FBXO46Q6PJ61 603 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 NLGN4XQ8N0W4 816 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 OR14A16Q8NHC5 309 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 FNDC8Q8TC99 324 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 FAM71F1Q96KD3 344 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 TEX10Q9NXF1 929 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 ZNF780AO75290 641 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 ZFAND5O76080 213 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 TFP02787 698 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 DCNP07585 359 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 ITGAMP11215 1152 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CATR1Q13166 79 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 IRF4Q15306 451 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 SBSNQ6UWP8 590 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 FAM83HQ6ZRV2 1179 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 SULF2Q8IWU5 870 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 C12orf76Q8N812 135 aaPredicted RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 TOMM40LQ969M1 308 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 BORCS6Q96GS4 357 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms