RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 INTS6Q9UL03 887 aaKnown RBP14.04□□□□□ -0.16
LMX1B-201ENST00000355497 IER3IP1Q9Y5U9 82 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 MAN2B1O00754 1011 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 STC2O76061 302 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF585AQ6P3V2 769 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 CDRT4Q8N9R6 151 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 ZFAND1Q8TCF1 268 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 BRIX1Q8TDN6 353 aaKnown RBP14.04□□□□□ -0.16
LMX1B-201ENST00000355497 MYADMQ96S97 322 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 OR6C65A6NJZ3 312 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 SFTPDP35247 375 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 RABIFP47224 123 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 SERTAD2Q14140 314 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 MPP7Q5T2T1 576 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 HACD4Q5VWC8 232 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
LMX1B-201ENST00000355497 SULF2Q8IWU5 870 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 HORMAD2Q8N7B1 307 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 SDR9C7Q8NEX9 313 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 FOXRED1Q96CU9 486 aaPredicted RBP14.04□□□□□ -0.16
LMX1B-201ENST00000355497 SMIM3Q9BZL3 60 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 ANKMY1Q9P2S6 941 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 FBXO7Q9Y3I1 522 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 EIF3FO00303 357 aaPredicted RBP14.04□□□□□ -0.16
LMX1B-201ENST00000355497 GLO1Q04760 184 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 GALNT1Q10472 559 aaPredicted RBP14.04□□□□□ -0.16
LMX1B-201ENST00000355497 NFATC4Q14934 902 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 OR9A2Q8NGT5 310 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 ZBTB8AQ96BR9 441 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 NICN1Q9BSH3 213 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 VRTNQ9H8Y1 702 aa14.04□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF840PA6NDX5 716 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 CYB5BO43169 146 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF780AO75290 641 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 SCGB1D1O95968 90 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 SNRNP70P08621 437 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 UBBP0CG47 229 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 UBCP0CG48 685 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 FUT1P19526 365 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 HMGCLP35914 325 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 RPS27AP62979 156 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 UBA52P62987 128 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 RDH10Q8IZV5 341 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 OR5D14Q8NGL3 314 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 TMEM239Q8WW34 195 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 RSC1A1Q92681 617 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 NMNAT2Q9BZQ4 307 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 TNFSF4P23510 183 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 HOXD13P35453 343 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 VEGFCP49767 419 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 SF3B4Q15427 424 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ABHD12BQ7Z5M8 362 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 CYB561A3Q8NBI2 242 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ALOXE3Q9BYJ1 711 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 CSNK1G3Q9Y6M4 447 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 KIDINS220Q9ULH0 1771 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 K7EPK0 472 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF888P0CJ79 500 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF28P17035 718 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ARSDP51689 593 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 CAMK2DQ13557 499 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ZC3H3Q8IXZ2 948 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 APCDD1Q8J025 514 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 FAM71E2Q8N5Q1 922 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 INTS14Q96SY0 518 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 KCMF1Q9P0J7 381 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 POLHQ9Y253 713 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 H3BML4 177 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 NPC1O15118 1278 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 YY2O15391 372 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 GPR137BO60478 399 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 UGDHO60701 494 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 PRKACBP22694 351 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 IL13RA1P78552 427 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 CLVS2Q5SYC1 327 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 LCN10Q6JVE6 187 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 PRR11Q96HE9 360 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 NXF5Q9H1B4 397 aaKnown RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 PIP5K1CO60331 668 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 EGFP01133 1207 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 MT-ND4P03905 459 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 RAB40BQ12829 278 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 PIN1Q13526 163 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-201ENST00000355497 ABHD17BQ5VST6 288 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 TSSK4Q6SA08 328 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 CHRDQ9H2X0 955 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 C5AR2Q9P296 337 aa14.03□□□□□ -0.16
LMX1B-201ENST00000355497 A0A087WUU8 490 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 KRBA1A5PL33 1030 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 CEBPZOSA8MTT3 80 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 TXNL1O43396 289 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 SSTR4P31391 388 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 MC3RP41968 323 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 HTR6P50406 440 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 EPHA4P54764 986 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 SCAPQ12770 1279 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 NOX3Q9HBY0 568 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms