RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ALOX12P18054 663 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ELAVL4P26378 380 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 ATP5C1P36542 298 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 ZNF235Q14590 738 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 NR0B2Q15466 257 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 FBXO43Q4G163 708 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 C10orf62Q5T681 223 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 ZNF425Q6IV72 752 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ABRAXAS1Q6UWZ7 409 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 LRRC49Q8IUZ0 686 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 CHCHD4Q8N4Q1 142 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 LSM14AQ8ND56 463 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 CADM4Q8NFZ8 388 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 CREB3L4Q8TEY5 395 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 SLC47A1Q96FL8 570 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 COQ10AQ96MF6 247 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ZNF587Q96SQ5 575 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 NAT9Q9BTE0 207 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PCED1AQ9H1Q7 454 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 TFB2MQ9H5Q4 396 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 WASH6PQ9NQA3 447 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 TXNL4BQ9NX01 149 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 PIPOXQ9P0Z9 390 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ZNF624Q9P2J8 865 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 TAC3Q9UHF0 121 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 FBXW2Q9UKT8 454 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PCDHB1Q9Y5F3 818 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 FAM234BA2RU67 622 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 AGAP5A6NIR3 686 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 SCG5P05408 212 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 GNPDA1P46926 289 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 CRYZQ08257 329 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 EXOSC6Q5RKV6 272 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 MISPQ8IVT2 679 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 LGI4Q8N135 537 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 FAM120BQ96EK7 910 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 FAM46AQ96IP4 442 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 INSM2Q96T92 566 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 EXOSC3Q9NQT5 275 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 PRDM9Q9NQV7 894 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 TVP23BQ9NYZ1 205 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PILRAQ9UKJ1 303 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 RPL26L1Q9UNX3 145 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 PCDHGB1Q9Y5G3 927 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 A0A1W2PPE3 182 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 FAM74A7A6NL05 159 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 TMEM114B3SHH9 223 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 BTN3A3O00478 584 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 CDRT1O95170 752 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 CALCBP10092 127 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 JUNBP17275 347 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 MAP4P27816 1152 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 MC3RP41968 323 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 XCR1P46094 333 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 RFX3P48380 749 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ALDH9A1P49189 494 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 LRRC74AQ0VAA2 488 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 STARD3Q14849 445 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 FAM74A3Q4VXF1 159 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 NANOGNBQ7Z5D8 188 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PIAS4Q8N2W9 510 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 OR11G2Q8NGC1 345 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 OR8K3Q8NH51 312 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 AHCYL2Q96HN2 611 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 COX4I2Q96KJ9 171 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 COL21A1Q96P44 957 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 STMN4Q9H169 189 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 INTS10Q9NVR2 710 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 CPED1A4D0V7 1026 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 C1orf105O95561 183 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 ANXA6P08133 673 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 DESP17661 470 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 RYKP34925 604 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 CRATP43155 626 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 LINC00205P59089 165 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 TATDN3Q17R31 274 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 ZNF468Q5VIY5 522 aaPredicted RBP5.15□□□□□ -1.58
CD47-201ENST00000355354 FKBP9P1Q75LS8 142 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 PARGQ86W56 976 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 C10orf90Q96M02 699 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 ZNF578Q96N58 590 aaPredicted RBP5.15□□□□□ -1.58
CD47-201ENST00000355354 SPRY4Q9C004 299 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 ZNF304Q9HCX3 659 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 SPATA7Q9P0W8 599 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 THAP10Q9P2Z0 257 aaPredicted RBP5.15□□□□□ -1.58
CD47-201ENST00000355354 ZAR1LA6NP61 321 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 LAMTOR5O43504 91 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 IMPDH2P12268 514 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 NDUFV2P19404 249 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 CERS1P27544 350 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 UQCRC1P31930 480 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 SCNN1AP37088 669 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 GIPRP48546 466 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 SLBPQ14493 270 aaKnown RBP eCLIP5.15□□□□□ -1.58
CD47-201ENST00000355354 FCN2Q15485 313 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 CD226Q15762 336 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 MOGQ16653 247 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 TIGD6Q17RP2 521 aa5.15□□□□□ -1.58
CD47-201ENST00000355354 SLC22A10Q63ZE4 541 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms