RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ZNF480Q8WV37 535 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 PLEKHA3Q9HB20 300 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 LRRC37A3O60309 1634 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 IFNA1P01562 189 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 GYPBP06028 91 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 C1SP09871 688 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 BMP2P12643 396 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 S100PP25815 95 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 WNT4P56705 351 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 FGL1Q08830 312 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 TMEM53Q6P2H8 277 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 VRK2Q86Y07 508 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 SYT3Q9BQG1 590 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 DUSP23Q9BVJ7 150 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 CBLCQ9ULV8 474 aa12.43□□□□□ -0.42
SCN8A-202ENST00000355133 RAB3AP20336 220 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 GPX3P22352 226 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 OR1D4P47884 311 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 TREX1Q9NSU2 369 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CHMP24386 653 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 GJA4P35212 333 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 GLO1Q04760 184 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 ZP2Q05996 745 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 MPP7Q5T2T1 576 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 LILRB2Q8N423 598 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 TRMT2BQ96GJ1 504 aaKnown RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 SLC30A3Q99726 388 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 PLEKHJ1Q9NW61 149 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CNOT11Q9UKZ1 510 aaKnown RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 POLHQ9Y253 713 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 FANCGO15287 622 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 ATG12O94817 140 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 RPS5P46782 204 aaKnown RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 ZNF704Q6ZNC4 412 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 SORT1Q99523 831 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CHRDQ9H2X0 955 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 THSD1Q9NS62 852 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 PAQR5Q9NXK6 330 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 ANKRD30BLA7E2S9 258 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 BMP4P12644 408 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 HOXD9P28356 352 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 NFATC4Q14934 902 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 AADACL4Q5VUY2 407 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 NDNFQ8TB73 568 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 BPIFA2Q96DR5 249 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 OR7D2Q96RA2 312 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 INIPQ9NRY2 104 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 OR6C2Q9NZP2 312 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CAMK2AQ9UQM7 478 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 SLC35A3Q9Y2D2 325 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 MEIS3P1A6NDR6 274 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 EFCAB7A8K855 629 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CAMLGP49069 296 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CDK5R2Q13319 367 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 ARHGAP19Q14CB8 494 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 C9orf135Q5VTT2 229 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 PPP1R3BQ86XI6 285 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 CHDHQ8NE62 594 aaPredicted RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 SLC2A12Q8TD20 617 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 TSNAXQ99598 290 aaKnown RBP12.42□□□□□ -0.42
SCN8A-202ENST00000355133 TMEM246Q9BRR3 403 aa12.42□□□□□ -0.42
SCN8A-202ENST00000355133 LOC285095A0A1B0GVY8 99 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 CASC3O15234 703 aaKnown RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 CER1O95813 267 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 WDPCPO95876 746 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 OR8U9P0C7N5 309 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 GABRR1P24046 479 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 HTR2AP28223 471 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 PRSS3P35030 304 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 PRLHRP49683 370 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 RGS6P49758 472 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 OR13J1Q8NGT2 312 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 INSM2Q96T92 566 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 NTMT1Q9BV86 223 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 TAS2R8Q9NYW2 309 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 NSG1A0A0A6YYJ2 146 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 TNFSF12O43508 249 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 OR2T1O43869 369 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 IDUAP35475 653 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 CHRNEQ04844 493 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 GPR50Q13585 617 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 P2RY14Q15391 338 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 RPE65Q16518 533 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 PAPD5Q8NDF8 572 aaKnown RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 INTS14Q96SY0 518 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 DCAF13Q9NV06 445 aaKnown RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 TMEM181Q9P2C4 612 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 DBHP09172 617 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 HIST1H1TP22492 207 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 AOAHP28039 575 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 VEZF1Q14119 521 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms