RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 C16orf58Q96GQ5 468 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 METTL2AQ96IZ6 378 aaKnown RBP14.19□□□□□ -0.14
PDGFA-201ENST00000354513 RNF145Q96MT1 663 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 TSSK3Q96PN8 268 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 CCT7Q99832 543 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 SLC39A3Q9BRY0 314 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 KLHL4Q9C0H6 718 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 CENPHQ9H3R5 247 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 VIPAS39Q9H9C1 493 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 LRTM1Q9HBL6 345 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 C1orf109Q9NX04 203 aa14.19□□□□□ -0.14
PDGFA-201ENST00000354513 MRTO4Q9UKD2 239 aaKnown RBP14.19□□□□□ -0.14
PDGFA-201ENST00000354513 NUP214P35658 2090 aaPredicted RBP14.19□□□□□ -0.14
PDGFA-201ENST00000354513 A0A1W2PRB8 838 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 DYNC1I1O14576 645 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 ADAMDEC1O15204 470 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 OIP5O43482 229 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 AKAP10O43572 662 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 CXCL13O43927 109 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 EFNA1P20827 205 aaPredicted RBP14.18□□□□□ -0.14
PDGFA-201ENST00000354513 KCNJ5P48544 419 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 PTH2RP49190 550 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 CLK3P49761 638 aaKnown RBP14.18□□□□□ -0.14
PDGFA-201ENST00000354513 CAPRIN1Q14444 709 aaKnown RBP14.18□□□□□ -0.14
PDGFA-201ENST00000354513 PCLAFQ15004 111 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 RFTN2Q52LD8 501 aaPredicted RBP14.18□□□□□ -0.14
PDGFA-201ENST00000354513 CDRT4Q8N9R6 151 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 GMPPAQ96IJ6 420 aaPredicted RBP14.18□□□□□ -0.14
PDGFA-201ENST00000354513 MS4A4EQ96PG1 132 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 TMEM204Q9BSN7 226 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 GSX2Q9BZM3 304 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 REEP4Q9H6H4 257 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 C3orf14Q9HBI5 128 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 MED17Q9NVC6 651 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 BAIAP2L1Q9UHR4 511 aa14.18□□□□□ -0.14
PDGFA-201ENST00000354513 CUBNO60494 3623 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 A0A087WZY1 265 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 TMEM233B4DJY2 109 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 TNFSF11O14788 317 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 LSM1O15116 133 aaKnown RBP14.17□□□□□ -0.14
PDGFA-201ENST00000354513 NDUFB5O43674 189 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 EFNA2O43921 213 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 MYZAPP0CAP1 466 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 PAX1P15863 534 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 AGTR1P30556 359 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 CRHR1P34998 444 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 PRKAG1P54619 331 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 NAA20P61599 178 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 RPL38P63173 70 aaKnown RBP14.17□□□□□ -0.14
PDGFA-201ENST00000354513 SGCBQ16585 318 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 CCDC153Q494R4 210 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 CCNJQ5T5M9 372 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 LIPMQ5VYY2 423 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 KANK2Q63ZY3 851 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 OR2V1Q8NHB1 315 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 ZNF524Q96C55 264 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 SH3YL1Q96HL8 342 aaPredicted RBP14.17□□□□□ -0.14
PDGFA-201ENST00000354513 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
PDGFA-201ENST00000354513 TMEM185BQ9H7F4 350 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 GIMAP2Q9UG22 337 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 ROS1P08922 2347 aa14.17□□□□□ -0.14
PDGFA-201ENST00000354513 SLC28A1O00337 649 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 AZIN1O14977 448 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 SMAD7O15105 426 aaKnown RBP14.16□□□□□ -0.14
PDGFA-201ENST00000354513 CRCPO75575 148 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 SASH3O75995 380 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 LINGO3P0C6S8 592 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 CPA3P15088 417 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 GPC1P35052 558 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 PRIM2P49643 509 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 RAC1P63000 192 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 KRTAP1-1Q07627 177 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 BEX5Q5H9J7 111 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 PPP4R4Q6NUP7 873 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 ZNF704Q6ZNC4 412 aaPredicted RBP14.16□□□□□ -0.14
PDGFA-201ENST00000354513 TRABD2AQ86V40 505 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 C10orf107Q8IVU9 208 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 WDR75Q8IWA0 830 aaKnown RBP14.16□□□□□ -0.14
PDGFA-201ENST00000354513 ACTRT2Q8TDY3 377 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 NUDT8Q8WV74 236 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 ZBTB8AQ96BR9 441 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 PPCDCQ96CD2 204 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 FAM120BQ96EK7 910 aaKnown RBP14.16□□□□□ -0.14
PDGFA-201ENST00000354513 SRXN1Q9BYN0 137 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 ACSS1Q9NUB1 689 aaPredicted RBP14.16□□□□□ -0.14
PDGFA-201ENST00000354513 EMC9Q9Y3B6 208 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 FIS1Q9Y3D6 152 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 DNAJC15Q9Y5T4 150 aa14.16□□□□□ -0.14
PDGFA-201ENST00000354513 CHD3Q12873 2000 aaKnown RBP14.16□□□□□ -0.14
PDGFA-201ENST00000354513 A0A1W2PQD3 144 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 KIAA1324LA8MWY0 1029 aaPredicted RBP14.15□□□□□ -0.14
PDGFA-201ENST00000354513 RGS14O43566 566 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 CHRNGP07510 517 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 LINC00032P0C843 101 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 RNF144AP50876 292 aaPredicted RBP14.15□□□□□ -0.14
PDGFA-201ENST00000354513 ZNF117Q03924 483 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 FOXF1Q12946 379 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 UGT3A2Q3SY77 523 aa14.15□□□□□ -0.14
PDGFA-201ENST00000354513 CFAP157Q5JU67 520 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms